Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR767-201ENST00000390228 109 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RNU6-1009P-201ENST00000390996 107 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AL031121.1-201ENST00000406553 254 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AL365400.1-201ENST00000431854 640 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC013470.1-201ENST00000453438 462 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AMD1P1-201ENST00000457220 922 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RPS29P26-201ENST00000477483 171 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 MRPL42P6-201ENST00000486397 371 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC008526.1-201ENST00000509149 338 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC092436.3-201ENST00000511788 257 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC091826.1-201ENST00000514065 313 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RNU6-566P-201ENST00000516790 107 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 RNU6-273P-201ENST00000516937 96 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC109479.2-201ENST00000517842 174 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AC091152.3-201ENST00000604227 325 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AL670379.10-201ENST00000604330 253 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 ELOCP5-201ENST00000604924 333 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 AL670379.9-201ENST00000605428 253 ntBASIC3.09□□□□□ -1.91
HMGB4Q8WW32 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGB4Q8WW32 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
HMGB4Q8WW32 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
HMGB4Q8WW32 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.09□□□□□ -1.92
HMGB4Q8WW32 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.09□□□□□ -1.92
HMGB4Q8WW32 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC103988.1-201ENST00000566382 2177 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 Y_RNA.142-201ENST00000363491 102 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 Y_RNA.184-201ENST00000363884 108 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AL356432.1-201ENST00000405809 419 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AL117339.3-201ENST00000418733 162 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC009414.1-201ENST00000427200 443 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 HMGB1P18-201ENST00000438801 619 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 MRPL50P4-201ENST00000446432 475 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC006026.2-201ENST00000457376 180 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC103851.1-201ENST00000506833 274 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 MTCYBP40-201ENST00000509390 1135 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC010265.1-201ENST00000513509 211 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 ACA59.2-201ENST00000517061 156 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC026371.1-201ENST00000551867 419 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC005668.1-201ENST00000571142 476 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 LARP7P1-201ENST00000605576 316 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC064836.2-201ENST00000609491 462 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC025253.1-201ENST00000613623 543 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 AC138627.2-201ENST00000624202 601 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 MIR7153-201ENST00000637758 57 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HMGB4Q8WW32 ZNF519P1-201ENST00000449011 1626 ntBASIC3.08□□□□□ -1.92
HMGB4Q8WW32 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 RNU6-562P-201ENST00000362731 107 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 RNA5SP139-201ENST00000364340 117 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 RNA5SP354-201ENST00000391247 136 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 UBE2V1P4-201ENST00000425374 344 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AL031274.1-201ENST00000450334 232 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 RNA5SP356-201ENST00000515972 94 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 RNA5SP454-201ENST00000517231 127 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 CR383656.8-201ENST00000549046 145 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AC007151.1-201ENST00000572774 483 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AC138761.3-201ENST00000579993 334 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 uc_338.15-201ENST00000615470 191 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AC063943.3-201ENST00000615562 356 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AC002064.3-201ENST00000623448 346 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 TPTEP1-208ENST00000636884 213 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 AC004944.1-201ENST00000517807 3059 ntBASIC3.07□□□□□ -1.92
HMGB4Q8WW32 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HMGB4Q8WW32 RNU6-827P-201ENST00000365553 106 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
HMGB4Q8WW32 RNU6-1027P-201ENST00000383998 107 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AL445529.1-201ENST00000398713 389 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 PTGES3P4-201ENST00000426243 356 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AL139132.1-201ENST00000431587 344 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.06□□□□□ -1.92
HMGB4Q8WW32 RAC1P5-201ENST00000512182 576 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 SCGB1D5P-201ENST00000515134 247 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 RNU6-377P-201ENST00000515965 102 ntBASIC3.06□□□□□ -1.92
HMGB4Q8WW32 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms