Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC092104.1-201ENST00000497346 1441 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 RNU6-898P-201ENST00000365627 104 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 SNORA75B-201ENST00000384053 137 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 RNU6-1200P-201ENST00000384162 107 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 MIR513B-201ENST00000385136 84 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 MIR561-201ENST00000385216 97 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AL033519.2-201ENST00000403958 392 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 FCF1P10-201ENST00000407590 479 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 RPL22P18-201ENST00000417197 377 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 MTND4P25-201ENST00000441039 533 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 GDI2P2-201ENST00000445131 608 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC087884.1-201ENST00000469738 328 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC011005.2-201ENST00000487324 359 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 HMGB1P35-201ENST00000503360 598 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 RNU6-914P-201ENST00000516749 109 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 SNORA31.19-201ENST00000517079 126 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 NDUFA5P6-201ENST00000542110 379 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC098848.2-201ENST00000588023 330 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 MTCO2P2-201ENST00000591258 225 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AL713866.2-201ENST00000603579 219 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AP000860.1-201ENST00000605250 559 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC022893.3-201ENST00000607665 437 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AC092953.2-201ENST00000608000 699 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 MIR6078-201ENST00000611069 100 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 AL031667.3-201ENST00000620124 655 ntBASIC1.35□□□□□ -2.19
LMX1AQ8TE12 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LMX1AQ8TE12 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 Y_RNA.116-201ENST00000363292 103 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 Y_RNA.118-201ENST00000363300 101 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 SNORA25B-201ENST00000365507 128 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 SNORA8-201ENST00000384574 139 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 MIR518A2-201ENST00000384966 87 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 SSR1P2-201ENST00000415208 787 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL160275.3-201ENST00000423876 471 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL022400.1-201ENST00000423946 935 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL353706.1-201ENST00000436728 494 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL078601.1-201ENST00000444542 271 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 MTND2P39-201ENST00000457230 764 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AC018868.1-201ENST00000491307 315 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 HMGN1P7-201ENST00000491722 313 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 SCARNA1-201ENST00000517138 166 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AC034114.1-201ENST00000520293 285 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL157871.3-201ENST00000557231 293 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL022154.1-201ENST00000604698 785 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AC018714.1-201ENST00000605028 208 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 FRG1KP-201ENST00000623592 341 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL078595.3-201ENST00000623815 1166 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 OR4G3P-201ENST00000633500 913 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AL512643.1-201ENST00000635735 524 ntBASIC1.34□□□□□ -2.19
LMX1AQ8TE12 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LMX1AQ8TE12 AP000560.1-201ENST00000624150 1937 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 RNU6-942P-201ENST00000363002 107 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 Y_RNA.224-201ENST00000364308 111 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 RNU6-946P-201ENST00000383878 107 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 RNA5SP212-201ENST00000391223 107 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 RN7SKP51-201ENST00000410781 304 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 RPL37P21-201ENST00000435890 276 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 MTND6P13-201ENST00000443510 523 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 MTND1P12-201ENST00000455231 147 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 DUXAP8-207ENST00000456786 622 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 RNU2-10P-201ENST00000516375 211 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AP003122.4-201ENST00000530980 758 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC090888.2-201ENST00000559765 1144 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC136619.2-201ENST00000563361 631 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC026271.5-201ENST00000577873 130 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC087045.1-201ENST00000605856 382 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC107952.2-201ENST00000606048 486 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 MIR6504-201ENST00000613520 61 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 AC130324.3-201ENST00000614165 542 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 MIR7111-201ENST00000619751 72 ntBASIC1.33□□□□□ -2.2
LMX1AQ8TE12 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.33□□□□□ -2.2
LMX1AQ8TE12 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.32□□□□□ -2.2
LMX1AQ8TE12 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
LMX1AQ8TE12 AC106754.1-201ENST00000562632 1513 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms