Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.2-201ENST00000362330 96 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 Y_RNA.252-201ENST00000364556 101 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SNORA63C-201ENST00000364578 129 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SNORA22B-201ENST00000383876 138 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 RNU6-658P-201ENST00000384606 106 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SNORA41-201ENST00000384675 132 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 RNU6-331P-201ENST00000384724 107 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 MIR606-201ENST00000384851 96 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 RNU1-101P-201ENST00000391171 127 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SNORA48.7-201ENST00000391302 135 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SAR1AP2-201ENST00000392696 594 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 U3.37-201ENST00000408528 213 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 MTND2P23-201ENST00000422990 651 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AL031274.1-201ENST00000450334 232 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC008571.1-201ENST00000467232 300 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 HMGN2P13-201ENST00000476476 274 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 RNU6-470P-201ENST00000515954 104 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SCARNA16.2-201ENST00000516520 172 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 SNORA70.18-201ENST00000516696 98 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 RNU6-307P-201ENST00000516743 106 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 RNU6-928P-201ENST00000516876 104 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC109446.1-201ENST00000566172 220 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC011890.2-201ENST00000613393 294 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 U4.6-201ENST00000621618 127 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 U4.7-201ENST00000638126 106 ntBASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.53□□□□□ -1.84
CCHCR1Q8TD31 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
CCHCR1Q8TD31 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 RNU6-884P-201ENST00000363889 107 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 MIR449B-201ENST00000384995 97 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 RPS4XP3-201ENST00000398541 413 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 NDUFS5P4-201ENST00000412983 318 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC243428.1-201ENST00000421099 264 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC091286.1-201ENST00000431233 461 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 HMGN2P31-201ENST00000432430 273 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AL035666.1-201ENST00000446195 348 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 RPL37P4-201ENST00000448908 268 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 snoU109.2-201ENST00000459316 135 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 HMGN1P10-201ENST00000474557 553 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 RNU6-327P-201ENST00000516270 127 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 MIR3609-201ENST00000582661 80 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC006504.6-201ENST00000590142 199 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC008739.3-201ENST00000603262 127 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC009314.1-201ENST00000603871 304 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 HSPE1P7-201ENST00000604681 321 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC005046.1-201ENST00000608515 625 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 AC040896.1-201ENST00000613819 479 ntBASIC3.52□□□□□ -1.85
CCHCR1Q8TD31 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RPL9P7-201ENST00000330965 580 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNU6-490P-201ENST00000362985 107 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNU6-1317P-201ENST00000364582 104 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 U8.8-201ENST00000365399 135 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNU6-790P-201ENST00000384479 105 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNU6-1160P-201ENST00000384546 104 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNU6-308P-201ENST00000390957 107 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RPS29P13-201ENST00000402041 169 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AL513475.1-201ENST00000406602 315 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RPL21P40-201ENST00000428586 483 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AL513043.1-201ENST00000439124 535 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 HIGD1AP2-201ENST00000446367 280 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RPL9P9-202ENST00000466501 579 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNA5SP385-201ENST00000515947 110 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 RNU6-1045P-201ENST00000516321 107 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC005476.1-201ENST00000554427 397 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC103996.1-201ENST00000555468 102 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC016925.2-201ENST00000605108 242 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC018889.1-201ENST00000605372 397 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AL355802.3-201ENST00000607571 545 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 MIR6076-201ENST00000617521 113 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 MIR6134-201ENST00000617606 109 ntBASIC3.51□□□□□ -1.85
CCHCR1Q8TD31 AC091925.1-201ENST00000623204 462 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms