Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 RPL31P35-201ENST00000431058 377 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL353706.1-201ENST00000436728 494 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL031667.1-201ENST00000440222 725 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL360271.2-201ENST00000447710 161 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL136380.1-201ENST00000447970 162 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RNA5SP269-201ENST00000459032 137 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 snoU109.1-201ENST00000459339 135 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 MTCO2P6-201ENST00000463134 685 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC090515.1-201ENST00000465295 476 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC116562.3-201ENST00000506136 177 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC008526.1-201ENST00000509149 338 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 RNU6-685P-201ENST00000517088 95 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC068587.5-201ENST00000528506 175 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 CBX3P7-201ENST00000532876 502 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 GNAI2P1-201ENST00000541815 315 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC079598.5-201ENST00000547460 117 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC087883.1-201ENST00000551882 391 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 MTND3P12-201ENST00000559068 328 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 MIR3682-201ENST00000581338 84 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC091834.1-201ENST00000614543 472 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC009233.1-201ENST00000616477 371 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AC084768.2-201ENST00000622736 221 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 AL359740.1-201ENST00000624340 592 ntBASIC1.63□□□□□ -2.15
LINC01560Q8TB33 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01560Q8TB33 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 FARSBP1-201ENST00000435808 1778 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU6-179P-201ENST00000363350 107 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU6-371P-201ENST00000364283 108 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 Y_RNA.238-201ENST00000364441 102 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 Y_RNA.367-201ENST00000365544 101 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU1-52P-201ENST00000384190 164 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU6-72P-201ENST00000384285 79 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU6-1179P-201ENST00000384667 107 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 Y_RNA.576-201ENST00000384781 102 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 MIR10A-201ENST00000385043 110 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AF274854.1-201ENST00000413236 615 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AL353621.1-201ENST00000418219 243 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 MTCYBP5-201ENST00000423752 1135 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AL627311.1-201ENST00000431514 115 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC000111.3-201ENST00000433478 193 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 MTND1P26-201ENST00000440488 538 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 NDUFB1P2-201ENST00000449477 176 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AL441985.1-201ENST00000457727 251 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 HMGB3P3-201ENST00000510526 400 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC108729.3-201ENST00000513484 108 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU5B-3P-201ENST00000516601 115 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 SNORA18.6-201ENST00000516792 115 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU1-40P-201ENST00000516816 164 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 RNU1-97P-201ENST00000516872 164 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC121758.2-201ENST00000553271 193 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC137800.2-201ENST00000574375 120 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 MTCYBP33-201ENST00000575007 1130 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AL138889.2-201ENST00000603883 242 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 SEPT7P9-203ENST00000604116 343 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC064872.1-201ENST00000604823 1072 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC005332.10-201ENST00000612725 619 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 AC092656.1-203ENST00000624134 423 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.62□□□□□ -2.15
LINC01560Q8TB33 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
LINC01560Q8TB33 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01560Q8TB33 Y_RNA.4-201ENST00000362333 112 ntBASIC1.61□□□□□ -2.15
LINC01560Q8TB33 RNU6-858P-201ENST00000362436 107 ntBASIC1.61□□□□□ -2.15
LINC01560Q8TB33 SNORA38-201ENST00000363946 132 ntBASIC1.61□□□□□ -2.15
LINC01560Q8TB33 RNU4-91P-201ENST00000364778 135 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms