Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL354941.1-201ENST00000438600 464 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RPS26P45-201ENST00000471748 340 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 SNORA3.4-201ENST00000515969 96 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU1-92P-201ENST00000517017 135 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC023050.2-201ENST00000544968 387 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MIR4698-201ENST00000577795 80 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AP001981.2-201ENST00000603241 418 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MIR1264-201ENST00000616374 69 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.610-201ENST00000410681 103 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC019178.2-201ENST00000423595 505 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MED14P1-201ENST00000430517 648 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 COX6CP18-201ENST00000448769 222 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RPL37P6-201ENST00000460682 294 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 TMEM251P1-201ENST00000503717 318 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 SNORA31.16-201ENST00000516773 139 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU6-528P-201ENST00000516926 100 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU2-19P-201ENST00000517288 84 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC013828.2-201ENST00000532487 235 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MIR4802-201ENST00000581881 80 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC144521.1-201ENST00000607148 956 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC099654.5-201ENST00000636479 350 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL139397.2-201ENST00000404529 772 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC007435.1-201ENST00000421086 415 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RPL39P6-201ENST00000448289 150 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC024619.4-201ENST00000580924 316 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.35-201ENST00000362601 101 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 Y_RNA.132-201ENST00000363421 102 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 SNORD56.4-201ENST00000363883 71 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNY3-201ENST00000365484 102 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU6-468P-201ENST00000384003 109 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MTCO1P56-201ENST00000401674 224 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC139712.2-201ENST00000424302 339 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MIR5589-201ENST00000579442 60 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MIR4653-201ENST00000585107 83 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 BBIP1P1-201ENST00000602999 279 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC091152.3-201ENST00000604227 325 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC012467.1-201ENST00000607740 256 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC007742.2-201ENST00000618226 398 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC007792.1-201ENST00000623023 402 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC231657.1-201ENST00000624313 397 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC091812.1-201ENST00000432235 1948 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU2-8P-201ENST00000410727 190 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MTCO3P5-201ENST00000433620 714 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU7-136P-201ENST00000458819 69 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU4-77P-201ENST00000516692 156 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU6-143P-201ENST00000516942 93 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LRRC6P1-201ENST00000532188 885 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL353997.4-201ENST00000586196 166 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC004805.2-201ENST00000605382 482 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 U1.36-201ENST00000620684 176 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL445264.1-201ENST00000621719 171 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 BTF3L4P2-201ENST00000392798 346 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNA5SP511-201ENST00000410487 115 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 VN1R36P-201ENST00000414936 291 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AL591704.2-201ENST00000421658 181 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 MTCYBP5-201ENST00000423752 1135 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC112198.4-201ENST00000515450 351 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC022784.5-201ENST00000522241 437 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC093510.2-201ENST00000562820 896 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.27□□□□□ -2.37
SYNE1Q8NF91 FTX_3.1-201ENST00000610451 147 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 uc_338.14-201ENST00000613162 166 ntBASIC0.27□□□□□ -2.37
SYNE1Q8NF91 RNU6-39P-201ENST00000384344 107 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU2-7P-201ENST00000410794 178 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RPS29P28-201ENST00000446439 141 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RPL30P1-201ENST00000488676 339 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 RNU6-1102P-201ENST00000516149 96 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 NRON-201ENST00000517270 370 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC068587.4-201ENST00000533893 186 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 HIGD1AP17-201ENST00000554576 276 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC008121.1-201ENST00000603244 268 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AC123912.5-201ENST00000605470 343 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 AP000676.3-201ENST00000623299 569 ntBASIC0.26□□□□□ -2.37
SYNE1Q8NF91 SNORD114-23-201ENST00000363536 72 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms