Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 Y_RNA.471-201ENST00000384312 102 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 Y_RNA.515-201ENST00000384535 112 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 FCF1P4-201ENST00000448326 183 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 RPS26P3-201ENST00000470205 348 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AC004057.1-201ENST00000485827 348 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 MTND1P19-201ENST00000511780 315 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 RNU6-1023P-201ENST00000516137 106 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 SNORA31.20-201ENST00000517111 133 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AP004371.1-201ENST00000525240 214 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 AC007375.1-201ENST00000554513 578 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 RPL12P50-201ENST00000603116 116 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LINC00116Q8NCU8 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LINC00116Q8NCU8 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
LINC00116Q8NCU8 AC004944.1-201ENST00000517807 3059 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 NEAT1-202ENST00000501122 22743 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AC004925.1-201ENST00000624256 2706 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 RNU6-595P-201ENST00000363944 107 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 RNA5SP126-201ENST00000365092 109 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 MIR548I3-201ENST00000408378 149 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 MIR548I1-201ENST00000408810 149 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 EIF4EP2-201ENST00000422816 654 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 TOMM20P4-201ENST00000427861 435 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 MTND2P29-201ENST00000438595 412 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 HMGB1P35-201ENST00000503360 598 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AC008885.1-201ENST00000514930 301 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 HMGB1P14-201ENST00000557424 591 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 MIR5701-3-201ENST00000578890 82 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 MIR5701-1-201ENST00000585138 82 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AC020914.4-201ENST00000597690 277 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AP000787.2-201ENST00000604432 568 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 MIR5701-2-201ENST00000615634 82 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AL360181.4-201ENST00000621752 134 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AC018692.3-201ENST00000623929 123 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 AC068647.1-201ENST00000489539 2265 ntBASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LINC00116Q8NCU8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 SNORD74.4-201ENST00000364129 80 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 RNU6-283P-201ENST00000364788 107 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 RNU6-301P-201ENST00000384277 107 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 RNU2-64P-201ENST00000411315 191 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 AC244098.2-201ENST00000422068 99 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 MTND4LP30-201ENST00000454092 297 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 RPL23AP45-201ENST00000476406 468 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 Y_RNA.673-201ENST00000516306 88 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 AP003733.2-201ENST00000529409 171 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 AC103996.1-201ENST00000555468 102 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 MIR5696-201ENST00000578474 85 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 RNA5SP108-201ENST00000605921 117 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 MIR8076-201ENST00000611401 83 ntBASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
LINC00116Q8NCU8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 LINC01355-201ENST00000566551 5444 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 Y_RNA.245-201ENST00000364493 95 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 Y_RNA.562-201ENST00000384695 113 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 MIR93-201ENST00000385024 80 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 RNU6-1093P-201ENST00000391194 107 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 Y_RNA.592-201ENST00000410274 109 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 AC004552.1-201ENST00000419089 348 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 LINC01399-202ENST00000458450 244 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 BTF3L4P4-201ENST00000506381 449 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 RNA5SP154-201ENST00000516193 111 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 RNU6-911P-201ENST00000516523 104 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 AC109329.1-201ENST00000518744 317 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 BMS1P21-201ENST00000634565 365 ntBASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.19□□□□□ -1.74
LINC00116Q8NCU8 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.18□□□□□ -1.74
LINC00116Q8NCU8 CEP170P1-201ENST00000502249 4587 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms