Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AL441985.1-201ENST00000457727 251 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC090515.1-201ENST00000465295 476 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC114781.4-201ENST00000513707 639 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC105417.1-201ENST00000514691 285 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 RN7SKP24-201ENST00000515888 284 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AL138976.2-201ENST00000563989 694 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC017083.3-201ENST00000609955 700 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 uc_338.14-201ENST00000613162 166 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC005609.4-201ENST00000625071 447 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AC099654.12-201ENST00000639868 649 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 MTND4P14-201ENST00000435799 1354 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
CCDC71LQ8N9Z2 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-517P-201ENST00000384362 110 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-45P-201ENST00000384471 107 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-903P-201ENST00000391270 109 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1140P-201ENST00000410517 106 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 CYCSP48-201ENST00000417124 323 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AL627311.1-201ENST00000431514 115 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 SNRPFP3-201ENST00000457792 225 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 TPTE2P5-203ENST00000458118 728 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 SCARNA18-201ENST00000459004 134 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 DYNLL1P5-201ENST00000467158 270 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC140059.1-201ENST00000489238 361 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MTCO3P9-201ENST00000506989 781 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC009646.1-201ENST00000510455 318 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU1-86P-201ENST00000516108 154 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-314P-201ENST00000516574 104 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 RNU1-107P-201ENST00000516617 154 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AP001893.2-201ENST00000526949 202 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AP005435.4-201ENST00000529514 284 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 BNIP3P6-201ENST00000549284 499 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC078814.3-201ENST00000553036 491 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MIR5571-201ENST00000577998 113 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MIR3200-201ENST00000580767 85 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC073539.2-201ENST00000597113 165 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC005000.2-201ENST00000605468 310 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AL121917.1-203ENST00000605534 577 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC087241.4-201ENST00000612441 480 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 uc_338.11-201ENST00000619132 160 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 AC068137.4-201ENST00000638485 296 ntBASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.96□□□□□ -2.1
CCDC71LQ8N9Z2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC006020.1-201ENST00000420179 1854 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 MTND5P30-201ENST00000452896 1731 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL354685.2-201ENST00000448218 1447 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-552P-201ENST00000362869 119 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-1085P-201ENST00000363576 107 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 SNORD14B-201ENST00000364533 90 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-384P-201ENST00000364900 104 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNA5SP37-201ENST00000365420 130 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 SNORA44-201ENST00000384584 132 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-748P-201ENST00000384648 107 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 SNORD37.1-201ENST00000390968 65 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 SNORD70.1-201ENST00000391007 85 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 RNU6-780P-201ENST00000391030 104 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 UBE2V1P10-201ENST00000414685 269 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC097463.2-201ENST00000421074 142 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC236972.1-201ENST00000433225 199 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 CALM1P1-201ENST00000442082 433 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AL031659.1-201ENST00000447075 539 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC073415.1-201ENST00000449240 153 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 FDX1P2-201ENST00000450769 375 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 GMFBP1-201ENST00000467831 427 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 HMGB1P30-201ENST00000492455 606 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC074344.1-201ENST00000512823 224 ntBASIC1.95□□□□□ -2.1
CCDC71LQ8N9Z2 AC104136.1-201ENST00000512969 394 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms