Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AC116655.1-201ENST00000508324 901 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU4-49P-201ENST00000516080 140 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-864P-201ENST00000516256 108 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC243972.3-201ENST00000539655 198 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC010653.1-201ENST00000571108 881 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC008121.1-201ENST00000603244 268 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RNU6-6P-201ENST00000606623 107 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC092794.2-201ENST00000620933 563 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC007318.2-201ENST00000620999 243 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 MIR6852-201ENST00000621699 66 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 RMST_7.1-201ENST00000621935 268 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AC103988.1-201ENST00000566382 2177 ntBASIC2.74□□□□□ -1.97
BEST3Q8N1M1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.74□□□□□ -1.97
BEST3Q8N1M1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-1252P-201ENST00000363054 104 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU1-100P-201ENST00000365255 165 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-128P-201ENST00000383976 107 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-1027P-201ENST00000383998 107 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 MIR767-201ENST00000390228 109 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-750P-201ENST00000390946 107 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RN7SKP32-201ENST00000410167 303 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU2-49P-201ENST00000410666 184 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 MTND3P8-201ENST00000412909 339 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 VN1R36P-201ENST00000414936 291 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AL161651.1-201ENST00000440882 223 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AL359672.1-201ENST00000442302 409 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC092001.1-201ENST00000453012 261 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-329P-201ENST00000459618 107 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 HMGN1P12-201ENST00000499125 195 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC114781.4-201ENST00000513707 639 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-581P-201ENST00000516214 105 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 RNU6-256P-201ENST00000516747 97 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC109479.2-201ENST00000517842 174 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 UBE2V2P2-201ENST00000587677 504 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC005498.1-201ENST00000592125 465 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC021646.1-201ENST00000605469 484 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AL022345.1-201ENST00000607292 135 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC004832.5-201ENST00000608677 401 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.73□□□□□ -1.97
BEST3Q8N1M1 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.73□□□□□ -1.97
BEST3Q8N1M1 AC004944.1-201ENST00000517807 3059 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC138393.1-203ENST00000327086 343 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 Y_RNA.166-201ENST00000363730 102 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 RNU6-214P-201ENST00000384130 107 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 SNORD56-201ENST00000413522 71 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AL135938.1-201ENST00000443141 297 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 RPS27P26-201ENST00000494583 239 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 Y_RNA.702-201ENST00000516843 96 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AP000889.2-201ENST00000532684 490 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC025423.5-201ENST00000550230 219 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC007151.1-201ENST00000572774 483 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 MIR4742-201ENST00000581069 85 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC100830.2-201ENST00000581636 240 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC024153.1-201ENST00000603103 365 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC123912.5-201ENST00000605470 343 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AL355073.2-201ENST00000612106 557 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 FAM157A-202ENST00000615155 405 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC110774.1-201ENST00000623567 2018 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC110079.1-202ENST00000635213 138 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 AC010889.1-201ENST00000566193 2666 ntBASIC2.72□□□□□ -1.97
BEST3Q8N1M1 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
BEST3Q8N1M1 RNU6-942P-201ENST00000363002 107 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AL365400.1-201ENST00000431854 640 ntBASIC2.71□□□□□ -1.98
BEST3Q8N1M1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.71□□□□□ -1.98
BEST3Q8N1M1 RPL23AP45-201ENST00000476406 468 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms