Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX4Q33E94 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX4Q33E94 AC025811.1-201ENST00000604312 472 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AL670379.4-201ENST00000605279 254 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX4Q33E94 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.85□□□□□ -2.11
RFX4Q33E94 MTND5P30-201ENST00000452896 1731 ntBASIC1.85□□□□□ -2.11
RFX4Q33E94 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
RFX4Q33E94 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.84□□□□□ -2.11
RFX4Q33E94 MIR449A-201ENST00000362113 91 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 RNU6-108P-201ENST00000365558 107 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 SNORA75-201ENST00000384158 137 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 RNU6-72P-201ENST00000384285 79 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 U6atac.2-201ENST00000408644 118 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC090960.1-201ENST00000421072 306 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 BX276092.3-201ENST00000424182 230 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX4Q33E94 AC027124.2-201ENST00000428249 105 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.84□□□□□ -2.11
RFX4Q33E94 CALM1P1-201ENST00000442082 433 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX4Q33E94 AC104058.1-201ENST00000448028 297 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 NDUFB1P2-201ENST00000449477 176 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC112771.1-201ENST00000463581 102 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.84□□□□□ -2.11
RFX4Q33E94 AC104806.1-201ENST00000508720 308 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX4Q33E94 RNU2-19P-201ENST00000517288 84 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 IGKV3-31-201ENST00000523109 329 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX4Q33E94 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.84□□□□□ -2.11
RFX4Q33E94 AL512310.1-201ENST00000548639 172 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AL133241.1-201ENST00000556832 487 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 MIR4528-201ENST00000577763 90 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 MIR4775-201ENST00000581168 75 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC245014.2-201ENST00000603689 287 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AL138889.2-201ENST00000603883 242 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AL670379.10-201ENST00000604330 253 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC246785.4-201ENST00000605374 287 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AL670379.9-201ENST00000605428 253 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC069294.1-201ENST00000608397 350 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
RFX4Q33E94 AC008147.4-201ENST00000617570 1204 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC099842.1-201ENST00000619919 596 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 SDR42E1P4-201ENST00000620894 481 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 Z69908.1-201ENST00000622603 247 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC244517.12-201ENST00000623581 663 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 AC091932.3-201ENST00000624223 323 ntBASIC1.84□□□□□ -2.11
RFX4Q33E94 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.84□□□□□ -2.11
RFX4Q33E94 Z75746.1-201ENST00000440243 2080 ntBASIC1.84□□□□□ -2.12
RFX4Q33E94 MTND5P17-201ENST00000418405 1603 ntBASIC1.84□□□□□ -2.12
RFX4Q33E94 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RFX4Q33E94 RNU6-486P-201ENST00000363116 107 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RNU6-181P-201ENST00000363225 107 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RNU6-1140P-201ENST00000410517 106 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RPL21P90-201ENST00000415692 466 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AL135786.1-201ENST00000415892 214 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC133104.1-201ENST00000429100 218 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AL356320.1-201ENST00000429616 163 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AL358934.1-201ENST00000432346 324 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.83□□□□□ -2.12
RFX4Q33E94 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX4Q33E94 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX4Q33E94 KATNBL1P3-201ENST00000443475 909 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC079781.2-201ENST00000446424 169 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 SNORA59A-201ENST00000459326 152 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX4Q33E94 RPL36AP48-201ENST00000485521 314 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX4Q33E94 AC008526.1-201ENST00000509149 338 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX4Q33E94 Y_RNA.687-201ENST00000516558 91 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RNU2-44P-201ENST00000516795 194 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RNU6-445P-201ENST00000516949 107 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RNU6-430P-201ENST00000517078 107 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 RANP3-201ENST00000530970 276 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 CBX3P7-201ENST00000532876 502 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.83□□□□□ -2.12
RFX4Q33E94 AC079598.5-201ENST00000547460 117 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 MIR4513-201ENST00000581077 86 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC012493.3-201ENST00000604494 112 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 Z84480.1-201ENST00000605131 311 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC087752.4-201ENST00000605911 462 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC006566.1-201ENST00000608943 513 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC009233.1-201ENST00000616477 371 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC136475.10-201ENST00000620253 385 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AC092656.1-203ENST00000624134 423 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 AP003400.5-201ENST00000624827 617 ntBASIC1.83□□□□□ -2.12
RFX4Q33E94 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
RFX4Q33E94 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
RFX4Q33E94 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.82□□□□□ -2.12
RFX4Q33E94 RNU6-116P-201ENST00000384042 109 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 MIR454-201ENST00000390180 115 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 RNU6-550P-201ENST00000391057 101 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 OR6C66P-201ENST00000414917 930 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 AC097463.2-201ENST00000421074 142 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 AL139413.1-201ENST00000421309 217 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 PGBD4P6-201ENST00000421501 610 ntBASIC1.82□□□□□ -2.12
RFX4Q33E94 MTCO2P34-201ENST00000421994 607 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms