Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC004383.1-201ENST00000438135 289 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.39□□□□□ -2.03
GABPAQ06546 AP001324.2-201ENST00000461163 319 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 RPS3AP17-201ENST00000472594 777 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.39□□□□□ -2.03
GABPAQ06546 RPL37P25-201ENST00000507308 276 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.39□□□□□ -2.03
GABPAQ06546 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.39□□□□□ -2.03
GABPAQ06546 RNU6-237P-201ENST00000515985 71 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.39□□□□□ -2.03
GABPAQ06546 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.39□□□□□ -2.03
GABPAQ06546 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.39□□□□□ -2.03
GABPAQ06546 AP002963.1-201ENST00000530590 184 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.39□□□□□ -2.03
GABPAQ06546 AC025449.1-201ENST00000603896 529 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 AL049779.4-201ENST00000604500 156 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 uc_338.14-201ENST00000613162 166 ntBASIC2.39□□□□□ -2.03
GABPAQ06546 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.39□□□□□ -2.03
GABPAQ06546 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.39□□□□□ -2.03
GABPAQ06546 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GABPAQ06546 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
GABPAQ06546 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.38□□□□□ -2.03
GABPAQ06546 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.38□□□□□ -2.03
GABPAQ06546 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.38□□□□□ -2.03
GABPAQ06546 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
GABPAQ06546 RNU6-858P-201ENST00000362436 107 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 RNU6-1029P-201ENST00000384109 107 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 RNU6-550P-201ENST00000391057 101 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AL133475.1-201ENST00000404414 305 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.38□□□□□ -2.03
GABPAQ06546 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.38□□□□□ -2.03
GABPAQ06546 PGBD4P6-201ENST00000421501 610 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.38□□□□□ -2.03
GABPAQ06546 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.38□□□□□ -2.03
GABPAQ06546 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.38□□□□□ -2.03
GABPAQ06546 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.38□□□□□ -2.03
GABPAQ06546 USP9YP8-201ENST00000441913 500 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.38□□□□□ -2.03
GABPAQ06546 AL360271.2-201ENST00000447710 161 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 MTND1P18-201ENST00000448191 573 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.38□□□□□ -2.03
GABPAQ06546 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.38□□□□□ -2.03
GABPAQ06546 SNORD27.1-201ENST00000516319 72 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.38□□□□□ -2.03
GABPAQ06546 AC015712.3-201ENST00000559380 164 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 MTND1P15-201ENST00000579262 949 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 MIR3199-1-201ENST00000582434 88 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AC008536.2-201ENST00000607284 349 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.38□□□□□ -2.03
GABPAQ06546 ZNF720P1-201ENST00000562403 1939 ntBASIC2.38□□□□□ -2.03
GABPAQ06546 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
GABPAQ06546 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
GABPAQ06546 AC010329.5-201ENST00000623497 2174 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 MTND4P27-201ENST00000450813 1354 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC009487.4-201ENST00000624969 3585 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 Y_RNA.296-201ENST00000364930 108 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 FTH1P15-201ENST00000406984 280 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.37□□□□□ -2.03
GABPAQ06546 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.37□□□□□ -2.03
GABPAQ06546 AC073901.1-201ENST00000462471 408 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC011005.2-201ENST00000487324 359 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC079382.1-201ENST00000493346 557 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC116337.1-201ENST00000509680 687 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.37□□□□□ -2.03
GABPAQ06546 SNORA25.11-201ENST00000515935 105 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.37□□□□□ -2.03
GABPAQ06546 AC135279.1-201ENST00000543493 504 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
GABPAQ06546 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.37□□□□□ -2.03
GABPAQ06546 MIR5089-201ENST00000580047 84 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC008945.2-201ENST00000606056 604 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC136475.10-201ENST00000620253 385 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AC092656.1-203ENST00000624134 423 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.37□□□□□ -2.03
GABPAQ06546 MTND5P30-201ENST00000452896 1731 ntBASIC2.37□□□□□ -2.03
GABPAQ06546 AL109809.4-201ENST00000603520 2185 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 RNU6-1120P-201ENST00000362988 108 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 RNU6-1042P-201ENST00000384204 107 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 RNU6-1119P-201ENST00000384349 108 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 RNU6-748P-201ENST00000384648 107 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 CIR1P3-201ENST00000405137 479 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 MTATP6P18-201ENST00000417994 673 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AC027124.2-201ENST00000428249 105 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AL596276.1-201ENST00000434465 418 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.36□□□□□ -2.03
GABPAQ06546 NDUFB1P2-201ENST00000449477 176 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.36□□□□□ -2.03
GABPAQ06546 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.36□□□□□ -2.03
GABPAQ06546 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.36□□□□□ -2.03
GABPAQ06546 TPT1P7-201ENST00000458300 517 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 MRPL42P6-201ENST00000486397 371 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 AC023141.11-201ENST00000508864 202 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 MTND3P25-201ENST00000509243 135 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 RNU6-1178P-201ENST00000516674 107 ntBASIC2.36□□□□□ -2.03
GABPAQ06546 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.36□□□□□ -2.03
GABPAQ06546 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.36□□□□□ -2.03
GABPAQ06546 OR5AQ1P-201ENST00000527596 927 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms