Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC-0.68□□□□□ -2.52
RPL39P62891 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 RNU6-1282P-201ENST00000516735 96 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC-0.68□□□□□ -2.52
RPL39P62891 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC-0.68□□□□□ -2.52
RPL39P62891 AC005951.2-201ENST00000576282 495 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 MIR4645-201ENST00000583158 77 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 AP000238.1-201ENST00000608759 426 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.68□□□□□ -2.52
RPL39P62891 SNORD114-28-201ENST00000363610 72 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 Y_RNA.269-201ENST00000364685 89 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 DHFRP6-201ENST00000401776 268 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 AC138623.1-201ENST00000418060 216 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC-0.69□□□□□ -2.52
RPL39P62891 AC093422.3-201ENST00000428506 305 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 FABP5P14-201ENST00000437273 393 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.69□□□□□ -2.52
RPL39P62891 HESX1-202ENST00000473921 757 ntTSL 5 BASIC-0.69□□□□□ -2.52
RPL39P62891 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.69□□□□□ -2.52
RPL39P62891 SCARNA8-201ENST00000515924 131 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 SNORD79.1-201ENST00000516069 84 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 RNU11-2P-201ENST00000516898 142 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 CYCSP27-201ENST00000527643 293 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 AC008127.2-201ENST00000549925 1075 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.69□□□□□ -2.52
RPL39P62891 AC007349.4-201ENST00000608114 532 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 MIR7973-1-201ENST00000614683 76 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 7SK.10-201ENST00000621414 298 ntBASIC-0.69□□□□□ -2.52
RPL39P62891 Y_RNA.36-201ENST00000362602 112 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 RNU6-251P-201ENST00000363235 104 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 RNA5SP127-201ENST00000411051 133 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 BTF3P8-201ENST00000414577 526 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 AC073261.1-201ENST00000429409 121 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC-0.7□□□□□ -2.52
RPL39P62891 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC-0.7□□□□□ -2.52
RPL39P62891 RPS3AP17-201ENST00000472594 777 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.7□□□□□ -2.52
RPL39P62891 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC-0.7□□□□□ -2.52
RPL39P62891 AL391813.1-201ENST00000603098 260 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 AL365434.2-201ENST00000607979 234 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.7□□□□□ -2.52
RPL39P62891 AC100810.6-201ENST00000638068 285 ntBASIC-0.7□□□□□ -2.52
RPL39P62891 AC092268.1-201ENST00000342691 405 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 RNU5E-1-201ENST00000362477 120 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 RNU6-288P-201ENST00000363690 104 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.71□□□□□ -2.52
RPL39P62891 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC-0.71□□□□□ -2.52
RPL39P62891 RNU6-969P-201ENST00000383900 105 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 RNU6-815P-201ENST00000384080 113 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 MIR520F-201ENST00000384824 87 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 FTH1P25-201ENST00000447665 469 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 RPL18AP17-201ENST00000455326 198 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 LARP7P4-201ENST00000481075 878 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC-0.71□□□□□ -2.52
RPL39P62891 RNU6-165P-201ENST00000517170 99 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 AC124293.1-201ENST00000530034 493 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 AL109933.3-201ENST00000619095 188 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 AP000943.4-201ENST00000622912 357 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 PCF11-AS1-201ENST00000602322 1516 ntBASIC-0.71□□□□□ -2.52
RPL39P62891 AC092447.10-201ENST00000620607 1652 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 SNORD114-31-201ENST00000363219 75 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 SNORA1.1-201ENST00000364671 133 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
RPL39P62891 SNORA36.2-201ENST00000384004 127 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 SNORA32.3-201ENST00000384772 121 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.72□□□□□ -2.52
RPL39P62891 RNU6-712P-201ENST00000410558 100 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC-0.72□□□□□ -2.52
RPL39P62891 FABP5P4-201ENST00000437203 171 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC-0.72□□□□□ -2.52
RPL39P62891 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC-0.72□□□□□ -2.52
RPL39P62891 SNORD4A-201ENST00000459174 72 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.72□□□□□ -2.52
RPL39P62891 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC-0.72□□□□□ -2.52
RPL39P62891 AL049870.4-201ENST00000555741 486 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 AC022523.2-201ENST00000561045 150 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 AC112187.2-201ENST00000604345 283 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 AC004775.1-201ENST00000607389 753 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 uc_338.6-201ENST00000613544 171 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 AL359854.1-201ENST00000614203 1594 ntBASIC-0.72□□□□□ -2.52
RPL39P62891 AL390237.1-201ENST00000404226 1415 ntBASIC-0.72□□□□□ -2.53
RPL39P62891 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
RPL39P62891 SNORD14C-201ENST00000365382 88 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 RNU6-163P-201ENST00000384396 106 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 MIR329-2-201ENST00000385029 84 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 MIR140-201ENST00000385282 100 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 RNU6-360P-201ENST00000390944 104 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 MIR1262-201ENST00000408276 93 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.73□□□□□ -2.53
RPL39P62891 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC-0.73□□□□□ -2.53
RPL39P62891 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC-0.73□□□□□ -2.53
RPL39P62891 AC105185.1-201ENST00000518705 535 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 IGLVI-20-201ENST00000519296 130 ntBASIC-0.73□□□□□ -2.53
RPL39P62891 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.73□□□□□ -2.53
RPL39P62891 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC-0.73□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms