Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR548F4-201ENST00000408515 105 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 RNU6-174P-201ENST00000410406 106 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 RNU2-23P-201ENST00000410545 195 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 RNU4-47P-201ENST00000410876 114 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 RNU2-71P-201ENST00000411395 189 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 HMGB3P2-201ENST00000411913 584 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 SNORD56-201ENST00000413522 71 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HERVK_113P62684 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.88□□□□□ -1.79
HERVK_113P62684 DPH3P2-201ENST00000422618 250 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.88□□□□□ -1.79
HERVK_113P62684 AL627311.1-201ENST00000431514 115 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.88□□□□□ -1.79
HERVK_113P62684 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.88□□□□□ -1.79
HERVK_113P62684 RPL17P19-201ENST00000489069 552 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC116655.1-201ENST00000508324 901 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.88□□□□□ -1.79
HERVK_113P62684 MTCO2P24-201ENST00000515611 426 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.88□□□□□ -1.79
HERVK_113P62684 AC026333.2-201ENST00000542164 106 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC005476.1-201ENST00000554427 397 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 HSBP1P1-201ENST00000555205 166 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 TRAV28-201ENST00000557548 323 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 MIR3149-201ENST00000584629 83 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AL451007.1-201ENST00000595491 289 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC008121.1-201ENST00000603244 268 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC009314.1-201ENST00000603871 304 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC104695.3-201ENST00000604052 296 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC018889.1-201ENST00000605372 397 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 AC006023.2-201ENST00000609916 167 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 MIR6852-201ENST00000621699 66 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HERVK_113P62684 AP001486.2-201ENST00000561652 5113 ntBASIC3.88□□□□□ -1.79
HERVK_113P62684 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
HERVK_113P62684 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.88□□□□□ -1.79
HERVK_113P62684 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.88□□□□□ -1.79
HERVK_113P62684 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HERVK_113P62684 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 Y_RNA.47-201ENST00000362697 108 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 RNU6-450P-201ENST00000364654 107 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 RNU6-99P-201ENST00000364721 107 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 MIR34A-201ENST00000385130 110 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HERVK_113P62684 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HERVK_113P62684 Y_RNA.645-201ENST00000391229 102 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 NDUFB1P2-201ENST00000449477 176 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.87□□□□□ -1.79
HERVK_113P62684 AC133134.1-201ENST00000466800 359 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 RPL23AP45-201ENST00000476406 468 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 AC006445.1-201ENST00000491925 405 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 AC022447.4-201ENST00000504053 364 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.87□□□□□ -1.79
HERVK_113P62684 TGIF1P1-201ENST00000558095 802 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 SUB1P3-201ENST00000564581 315 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.87□□□□□ -1.79
HERVK_113P62684 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.87□□□□□ -1.79
HERVK_113P62684 AC006006.1-201ENST00000603082 144 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 AC073657.2-201ENST00000605661 303 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 AC138627.2-201ENST00000624202 601 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 Z69720.2-201ENST00000624755 279 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.87□□□□□ -1.79
HERVK_113P62684 U6.99-201ENST00000637524 83 ntBASIC3.87□□□□□ -1.79
HERVK_113P62684 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.87□□□□□ -1.79
HERVK_113P62684 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HERVK_113P62684 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
HERVK_113P62684 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.86□□□□□ -1.79
HERVK_113P62684 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERVK_113P62684 RNU6-596P-201ENST00000365395 98 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 RNU6-26P-201ENST00000383985 107 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 Y_RNA.424-201ENST00000384063 103 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 MIR1302-3-201ENST00000408128 138 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 RNU6-101P-201ENST00000410323 104 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.86□□□□□ -1.79
HERVK_113P62684 Z82210.1-201ENST00000440037 231 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AL078601.1-201ENST00000444542 271 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AL353752.1-201ENST00000454946 260 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC092798.1-201ENST00000458542 409 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 snoU109.2-201ENST00000459316 135 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.86□□□□□ -1.79
HERVK_113P62684 AK3P2-201ENST00000507976 429 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 RNU4-77P-201ENST00000516692 156 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AP002404.1-201ENST00000532005 451 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC103996.1-201ENST00000555468 102 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC113195.1-201ENST00000579952 141 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.86□□□□□ -1.79
HERVK_113P62684 AL645944.1-201ENST00000603857 493 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AP000787.2-201ENST00000604432 568 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AC004852.3-201ENST00000614131 326 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 AL161629.2-201ENST00000615347 275 ntBASIC3.86□□□□□ -1.79
HERVK_113P62684 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERVK_113P62684 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.86□□□□□ -1.79
HERVK_113P62684 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERVK_113P62684 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HERVK_113P62684 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
HERVK_113P62684 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms