Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RMST_7.1-201ENST00000621935 268 ntBASIC2.7□□□□□ -1.98
CLDN20P56880 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CLDN20P56880 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN20P56880 RNU6-525P-201ENST00000363685 104 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 RNU1-140P-201ENST00000365040 165 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 RNU6-1280P-201ENST00000365211 107 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 RNU6-128P-201ENST00000383976 107 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 SNORA44-201ENST00000384584 132 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 RNU6-750P-201ENST00000390946 107 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AC096664.2-201ENST00000411843 406 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 SNORD56-201ENST00000413522 71 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 VN1R36P-201ENST00000414936 291 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL451074.5-201ENST00000415894 435 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.69□□□□□ -1.98
CLDN20P56880 AC022018.1-201ENST00000430685 241 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 MTND4LP16-201ENST00000440828 295 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL161651.1-201ENST00000440882 223 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL359672.1-201ENST00000442302 409 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN20P56880 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN20P56880 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN20P56880 AC116655.1-201ENST00000508324 901 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 RNU6-581P-201ENST00000516214 105 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 Y_RNA.702-201ENST00000516843 96 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AC109479.2-201ENST00000517842 174 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN20P56880 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CLDN20P56880 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN20P56880 AC010653.1-201ENST00000571108 881 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 MIR4742-201ENST00000581069 85 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 MIR3942-201ENST00000585264 109 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 UBE2V2P2-201ENST00000587677 504 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AC005498.1-201ENST00000592125 465 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN20P56880 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL160281.1-201ENST00000605307 311 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL022345.1-201ENST00000607292 135 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 AL359198.2-201ENST00000611836 194 ntBASIC2.69□□□□□ -1.98
CLDN20P56880 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.69□□□□□ -1.98
CLDN20P56880 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.69□□□□□ -1.98
CLDN20P56880 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
CLDN20P56880 AC000403.1-201ENST00000613696 3585 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN20P56880 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN20P56880 AC138393.1-203ENST00000327086 343 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 RNU6-1027P-201ENST00000383998 107 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 RNA5SP354-201ENST00000391247 136 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 UBA52P6-201ENST00000399822 382 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 RNA5SP274-201ENST00000410484 108 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN20P56880 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN20P56880 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN20P56880 RPL23AP45-201ENST00000476406 468 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 RPS27AP9-201ENST00000477681 438 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 RN7SL633P-201ENST00000488974 297 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 RPS27P26-201ENST00000494583 239 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.68□□□□□ -1.98
CLDN20P56880 AC114781.4-201ENST00000513707 639 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.68□□□□□ -1.98
CLDN20P56880 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.68□□□□□ -1.98
CLDN20P56880 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN20P56880 AC025423.5-201ENST00000550230 219 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC100830.2-201ENST00000581636 240 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC024153.1-201ENST00000603103 365 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.68□□□□□ -1.98
CLDN20P56880 AL355073.2-201ENST00000612106 557 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC010378.1-201ENST00000619270 362 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN20P56880 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC110079.1-202ENST00000635213 138 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC010889.1-201ENST00000566193 2666 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 AC004944.1-201ENST00000517807 3059 ntBASIC2.68□□□□□ -1.98
CLDN20P56880 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN20P56880 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CLDN20P56880 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
CLDN20P56880 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.68□□□□□ -1.98
CLDN20P56880 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.68□□□□□ -1.98
CLDN20P56880 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN20P56880 AC092435.3-201ENST00000565538 3654 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN20P56880 RNU6-942P-201ENST00000363002 107 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 Y_RNA.212-201ENST00000364177 102 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 RNU5E-7P-201ENST00000365290 117 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 RNU6-214P-201ENST00000384130 107 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 Y_RNA.604-201ENST00000410574 102 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN20P56880 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN20P56880 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN20P56880 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
CLDN20P56880 RPS29P26-201ENST00000477483 171 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 RPL7P43-201ENST00000478876 753 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.67□□□□□ -1.98
CLDN20P56880 AC008628.2-201ENST00000502605 298 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN20P56880 RNU6-1332P-201ENST00000516666 104 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 RN7SKP282-201ENST00000516824 299 ntBASIC2.67□□□□□ -1.98
CLDN20P56880 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.67□□□□□ -1.98
CLDN20P56880 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms