Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-835P-201ENST00000516974 104 ntBASIC2.38□□□□□ -2.03
PEX3P56589 SNORD19.2-201ENST00000516978 73 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.38□□□□□ -2.03
PEX3P56589 AK6P1-201ENST00000540219 478 ntBASIC2.38□□□□□ -2.03
PEX3P56589 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PEX3P56589 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
PEX3P56589 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.38□□□□□ -2.03
PEX3P56589 TPRKBP2-201ENST00000565969 475 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.38□□□□□ -2.03
PEX3P56589 MIR4424-201ENST00000585257 86 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AL391813.1-201ENST00000603098 260 ntBASIC2.38□□□□□ -2.03
PEX3P56589 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.38□□□□□ -2.03
PEX3P56589 MIR6895-201ENST00000613497 78 ntBASIC2.38□□□□□ -2.03
PEX3P56589 RN7SL853P-201ENST00000617250 223 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AC010378.1-201ENST00000619270 362 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.38□□□□□ -2.03
PEX3P56589 AC139792.3-201ENST00000623525 224 ntBASIC2.38□□□□□ -2.03
PEX3P56589 U6.114-201ENST00000636407 96 ntBASIC2.38□□□□□ -2.03
PEX3P56589 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.38□□□□□ -2.03
PEX3P56589 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.38□□□□□ -2.03
PEX3P56589 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
PEX3P56589 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
PEX3P56589 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
PEX3P56589 RNU6-1287P-201ENST00000362914 107 ntBASIC2.37□□□□□ -2.03
PEX3P56589 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
PEX3P56589 Y_RNA.409-201ENST00000383990 98 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RNU6-116P-201ENST00000384042 109 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RNU6-517P-201ENST00000384362 110 ntBASIC2.37□□□□□ -2.03
PEX3P56589 Y_RNA.516-201ENST00000384541 124 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RNU6-1060P-201ENST00000384664 107 ntBASIC2.37□□□□□ -2.03
PEX3P56589 SNORA64-201ENST00000384674 134 ntBASIC2.37□□□□□ -2.03
PEX3P56589 MIR767-201ENST00000390228 109 ntBASIC2.37□□□□□ -2.03
PEX3P56589 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PEX3P56589 AL023284.1-201ENST00000403956 276 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RN7SKP32-201ENST00000410167 303 ntBASIC2.37□□□□□ -2.03
PEX3P56589 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.37□□□□□ -2.03
PEX3P56589 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.37□□□□□ -2.03
PEX3P56589 TIMM9P3-201ENST00000428659 274 ntBASIC2.37□□□□□ -2.03
PEX3P56589 PSPHP1-201ENST00000450062 261 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RNU7-63P-201ENST00000459054 62 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RNU7-180P-201ENST00000459240 63 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC006512.1-201ENST00000468816 291 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC011005.2-201ENST00000487324 359 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.37□□□□□ -2.03
PEX3P56589 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.37□□□□□ -2.03
PEX3P56589 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.37□□□□□ -2.03
PEX3P56589 RNU1-41P-201ENST00000516161 162 ntBASIC2.37□□□□□ -2.03
PEX3P56589 RNU1-48P-201ENST00000516400 162 ntBASIC2.37□□□□□ -2.03
PEX3P56589 Y_RNA.693-201ENST00000516641 110 ntBASIC2.37□□□□□ -2.03
PEX3P56589 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.37□□□□□ -2.03
PEX3P56589 GLYCAM1-201ENST00000546596 285 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC245505.1-201ENST00000556398 224 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.37□□□□□ -2.03
PEX3P56589 MIR4782-201ENST00000577987 79 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.37□□□□□ -2.03
PEX3P56589 AC012507.3-201ENST00000603556 477 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC091152.3-201ENST00000604227 325 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AL670379.4-201ENST00000605279 254 ntBASIC2.37□□□□□ -2.03
PEX3P56589 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.37□□□□□ -2.03
PEX3P56589 AC008536.2-201ENST00000607284 349 ntBASIC2.37□□□□□ -2.03
PEX3P56589 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
PEX3P56589 AC010889.1-201ENST00000566193 2666 ntBASIC2.37□□□□□ -2.03
PEX3P56589 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PEX3P56589 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.36□□□□□ -2.03
PEX3P56589 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
PEX3P56589 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.36□□□□□ -2.03
PEX3P56589 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PEX3P56589 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PEX3P56589 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
PEX3P56589 RNU6-715P-201ENST00000365204 103 ntBASIC2.36□□□□□ -2.03
PEX3P56589 RNU6-996P-201ENST00000365438 107 ntBASIC2.36□□□□□ -2.03
PEX3P56589 SNORA70B-201ENST00000384210 135 ntBASIC2.36□□□□□ -2.03
PEX3P56589 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
PEX3P56589 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
PEX3P56589 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
PEX3P56589 RNU6-607P-201ENST00000411283 108 ntBASIC2.36□□□□□ -2.03
PEX3P56589 CYCSP33-201ENST00000414485 327 ntBASIC2.36□□□□□ -2.03
PEX3P56589 MTCYBP8-201ENST00000422855 651 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AL627311.1-201ENST00000431514 115 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.36□□□□□ -2.03
PEX3P56589 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.36□□□□□ -2.03
PEX3P56589 RPL31P41-201ENST00000477967 372 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AL163973.1-201ENST00000484753 577 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.36□□□□□ -2.03
PEX3P56589 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.36□□□□□ -2.03
PEX3P56589 AC009646.1-201ENST00000510455 318 ntBASIC2.36□□□□□ -2.03
PEX3P56589 MRPS36P2-201ENST00000512569 299 ntBASIC2.36□□□□□ -2.03
PEX3P56589 RNU6-506P-201ENST00000516553 94 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.36□□□□□ -2.03
PEX3P56589 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC2.36□□□□□ -2.03
PEX3P56589 AC016957.1-201ENST00000534895 309 ntBASIC2.36□□□□□ -2.03
PEX3P56589 HIF1AP1-201ENST00000553642 175 ntBASIC2.36□□□□□ -2.03
PEX3P56589 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.36□□□□□ -2.03
PEX3P56589 AC027807.1-201ENST00000559921 996 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.36□□□□□ -2.03
PEX3P56589 MIR5583-1-201ENST00000580941 59 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.36□□□□□ -2.03
PEX3P56589 AC005261.5-201ENST00000596280 355 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AF250324.2-201ENST00000608299 610 ntBASIC2.36□□□□□ -2.03
PEX3P56589 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms