Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC008837.2-201ENST00000513076 418 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 SNORA31.3-201ENST00000516029 96 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 SNORA31.16-201ENST00000516773 139 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 RN7SKP256-201ENST00000517201 314 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 CYCSP23-201ENST00000519781 313 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 OR6C7P-201ENST00000547875 934 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AC093012.1-202ENST00000549403 582 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AL512310.8-201ENST00000550183 120 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 MIR5094-201ENST00000578766 85 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 MTCO2P2-201ENST00000591258 225 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AC005332.6-201ENST00000613178 446 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.63□□□□□ -2.31
GTF2A1P52655 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.63□□□□□ -2.31
GTF2A1P52655 AC018926.1-201ENST00000616335 435 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AL157770.1-201ENST00000623049 439 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 AC107982.1-201ENST00000507171 1300 ntBASIC0.63□□□□□ -2.31
GTF2A1P52655 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
GTF2A1P52655 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
GTF2A1P52655 AL161781.1-201ENST00000354277 403 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 RNU6-1080P-201ENST00000383982 107 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 MIR222-201ENST00000384992 110 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 SNORD65.1-201ENST00000390889 71 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 RNU11-5P-201ENST00000391216 129 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AC104651.1-201ENST00000427559 735 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.62□□□□□ -2.31
GTF2A1P52655 SEPT7P5-201ENST00000434048 306 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AC244505.5-201ENST00000443639 207 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.62□□□□□ -2.31
GTF2A1P52655 BTF3P15-201ENST00000455606 336 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 RNA5SP269-201ENST00000459032 137 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
GTF2A1P52655 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.62□□□□□ -2.31
GTF2A1P52655 RN7SKP88-201ENST00000516847 250 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.62□□□□□ -2.31
GTF2A1P52655 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.62□□□□□ -2.31
GTF2A1P52655 AL356057.1-201ENST00000533798 831 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC0.62□□□□□ -2.31
GTF2A1P52655 SNRPGP1-201ENST00000553864 222 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 TRAV32-201ENST00000553993 340 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AC122134.1-202ENST00000569111 1201 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.62□□□□□ -2.31
GTF2A1P52655 AP003465.2-201ENST00000602571 373 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AP000942.3-201ENST00000603702 160 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 7SK.8-201ENST00000612110 250 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 uc_338.15-201ENST00000615470 191 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 7SK.11-201ENST00000615477 250 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 7SK.13-201ENST00000622040 250 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AC093648.1-201ENST00000623546 606 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 AC120349.3-201ENST00000624377 529 ntBASIC0.62□□□□□ -2.31
GTF2A1P52655 MTND5P35-201ENST00000557537 1720 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.61□□□□□ -2.31
GTF2A1P52655 RNU6-529P-201ENST00000363383 104 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 RNU6-288P-201ENST00000363690 104 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 U6.112-201ENST00000384129 70 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 RNU6-883P-201ENST00000384597 107 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 RPL21P24-201ENST00000413752 448 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 DPRXP1-201ENST00000426312 460 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.61□□□□□ -2.31
GTF2A1P52655 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.61□□□□□ -2.31
GTF2A1P52655 HSPE1P9-201ENST00000440046 311 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.61□□□□□ -2.31
GTF2A1P52655 SEPT14P24-201ENST00000447236 180 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.61□□□□□ -2.31
GTF2A1P52655 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.61□□□□□ -2.31
GTF2A1P52655 RPL30P6-201ENST00000475925 342 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.61□□□□□ -2.31
GTF2A1P52655 AC117454.1-201ENST00000491120 168 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.61□□□□□ -2.31
GTF2A1P52655 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.61□□□□□ -2.31
GTF2A1P52655 RNU6-572P-201ENST00000516724 80 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.61□□□□□ -2.31
GTF2A1P52655 AP003484.1-201ENST00000530974 250 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.61□□□□□ -2.31
GTF2A1P52655 HIGD1AP17-201ENST00000554576 276 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.61□□□□□ -2.31
GTF2A1P52655 AC136618.2-201ENST00000575091 400 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 AC005786.1-201ENST00000588553 154 ntBASIC0.61□□□□□ -2.31
GTF2A1P52655 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.61□□□□□ -2.31
GTF2A1P52655 AC092447.10-201ENST00000620607 1652 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
GTF2A1P52655 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
GTF2A1P52655 MIR373-201ENST00000362273 69 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 AL359634.1-202ENST00000404721 284 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AL157398.1-201ENST00000452981 186 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 MED28P2-201ENST00000475771 317 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AC015688.6-201ENST00000577737 104 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 AC098848.2-201ENST00000588023 330 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 BNIP3P16-201ENST00000589779 534 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 ZNF92P2-201ENST00000600543 1059 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 MIR1248-201ENST00000629190 106 ntBASIC0.6□□□□□ -2.31
GTF2A1P52655 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.6□□□□□ -2.31
GTF2A1P52655 AC009541.1-201ENST00000438279 2662 ntBASIC0.59□□□□□ -2.31
GTF2A1P52655 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms