Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Y_RNA.504-201ENST00000384481 104 ntBASIC4.4□□□□□ -1.71
USP11P51784 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
USP11P51784 SNORD78.2-201ENST00000391076 69 ntBASIC4.4□□□□□ -1.71
USP11P51784 MTCO1P39-201ENST00000426148 480 ntBASIC4.4□□□□□ -1.71
USP11P51784 RPL21P40-201ENST00000428586 483 ntBASIC4.4□□□□□ -1.71
USP11P51784 SNORD108-201ENST00000459332 71 ntBASIC4.4□□□□□ -1.71
USP11P51784 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.4□□□□□ -1.71
USP11P51784 RPS26P21-201ENST00000475397 348 ntBASIC4.4□□□□□ -1.71
USP11P51784 MRPL42P6-201ENST00000486397 371 ntBASIC4.4□□□□□ -1.71
USP11P51784 RPL21P13-201ENST00000488305 481 ntBASIC4.4□□□□□ -1.71
USP11P51784 RN7SL323P-201ENST00000494712 295 ntBASIC4.4□□□□□ -1.71
USP11P51784 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.4□□□□□ -1.71
USP11P51784 AC026726.1-201ENST00000512859 601 ntBASIC4.4□□□□□ -1.71
USP11P51784 RNA5SP164-201ENST00000516533 110 ntBASIC4.4□□□□□ -1.71
USP11P51784 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.4□□□□□ -1.71
USP11P51784 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
USP11P51784 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.4□□□□□ -1.71
USP11P51784 RNA5SP108-201ENST00000605921 117 ntBASIC4.4□□□□□ -1.71
USP11P51784 AC097372.5-201ENST00000623665 376 ntBASIC4.4□□□□□ -1.71
USP11P51784 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.4□□□□□ -1.71
USP11P51784 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.4□□□□□ -1.71
USP11P51784 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.4□□□□□ -1.71
USP11P51784 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.4□□□□□ -1.71
USP11P51784 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.4□□□□□ -1.71
USP11P51784 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
USP11P51784 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
USP11P51784 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.39□□□□□ -1.71
USP11P51784 AC116096.1-201ENST00000566804 2314 ntBASIC4.39□□□□□ -1.71
USP11P51784 LINC02471-203ENST00000641941 4752 ntBASIC4.39□□□□□ -1.71
USP11P51784 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.39□□□□□ -1.71
USP11P51784 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP11P51784 RNU6-222P-201ENST00000362438 107 ntBASIC4.39□□□□□ -1.71
USP11P51784 RNU6-1020P-201ENST00000363684 107 ntBASIC4.39□□□□□ -1.71
USP11P51784 SNORD50.2-201ENST00000365465 70 ntBASIC4.39□□□□□ -1.71
USP11P51784 RNU6-1074P-201ENST00000383995 104 ntBASIC4.39□□□□□ -1.71
USP11P51784 MIR10A-201ENST00000385043 110 ntBASIC4.39□□□□□ -1.71
USP11P51784 MIR514A1-201ENST00000385133 98 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.39□□□□□ -1.71
USP11P51784 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.39□□□□□ -1.71
USP11P51784 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.39□□□□□ -1.71
USP11P51784 AL627311.1-201ENST00000431514 115 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.39□□□□□ -1.71
USP11P51784 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.39□□□□□ -1.71
USP11P51784 SNORA84-201ENST00000459229 133 ntBASIC4.39□□□□□ -1.71
USP11P51784 SNORA70.14-201ENST00000516205 110 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.39□□□□□ -1.71
USP11P51784 HSPE1P5-201ENST00000561489 272 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC010928.2-201ENST00000588017 287 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC002545.1-201ENST00000592511 181 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC110741.2-201ENST00000605278 268 ntBASIC4.39□□□□□ -1.71
USP11P51784 MIR92B-201ENST00000607575 96 ntBASIC4.39□□□□□ -1.71
USP11P51784 AL365265.1-201ENST00000621045 234 ntBASIC4.39□□□□□ -1.71
USP11P51784 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
USP11P51784 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP11P51784 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.39□□□□□ -1.71
USP11P51784 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.39□□□□□ -1.71
USP11P51784 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.39□□□□□ -1.71
USP11P51784 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
USP11P51784 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
USP11P51784 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
USP11P51784 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP11P51784 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
USP11P51784 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP11P51784 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.38□□□□□ -1.71
USP11P51784 AL359837.1-201ENST00000381357 287 ntBASIC4.38□□□□□ -1.71
USP11P51784 Y_RNA.383-201ENST00000383855 97 ntBASIC4.38□□□□□ -1.71
USP11P51784 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
USP11P51784 AL033519.2-201ENST00000403958 392 ntBASIC4.38□□□□□ -1.71
USP11P51784 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.38□□□□□ -1.71
USP11P51784 RPS29P7-201ENST00000439662 171 ntBASIC4.38□□□□□ -1.71
USP11P51784 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.38□□□□□ -1.71
USP11P51784 AC091021.1-201ENST00000468051 388 ntBASIC4.38□□□□□ -1.71
USP11P51784 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.38□□□□□ -1.71
USP11P51784 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.38□□□□□ -1.71
USP11P51784 AL360157.1-201ENST00000565962 87 ntBASIC4.38□□□□□ -1.71
USP11P51784 MIR5685-201ENST00000579080 79 ntBASIC4.38□□□□□ -1.71
USP11P51784 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.38□□□□□ -1.71
USP11P51784 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
USP11P51784 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP11P51784 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
USP11P51784 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
USP11P51784 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
USP11P51784 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP11P51784 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.37□□□□□ -1.71
USP11P51784 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
USP11P51784 RNU6-336P-201ENST00000364891 107 ntBASIC4.37□□□□□ -1.71
USP11P51784 RNU6-318P-201ENST00000384283 103 ntBASIC4.37□□□□□ -1.71
USP11P51784 RNU6-1081P-201ENST00000384537 107 ntBASIC4.37□□□□□ -1.71
USP11P51784 MIR30B-201ENST00000384850 88 ntBASIC4.37□□□□□ -1.71
USP11P51784 AL138878.1-201ENST00000405131 347 ntBASIC4.37□□□□□ -1.71
USP11P51784 RNU6-394P-201ENST00000410735 107 ntBASIC4.37□□□□□ -1.71
USP11P51784 PIGFP3-201ENST00000441918 722 ntBASIC4.37□□□□□ -1.71
USP11P51784 SCARNA14-201ENST00000516903 136 ntBASIC4.37□□□□□ -1.71
USP11P51784 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.37□□□□□ -1.71
USP11P51784 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.37□□□□□ -1.71
USP11P51784 MIR3144-201ENST00000579460 79 ntBASIC4.37□□□□□ -1.71
USP11P51784 MIR4282-201ENST00000583613 67 ntBASIC4.37□□□□□ -1.71
USP11P51784 AL162424.1-201ENST00000602325 221 ntBASIC4.37□□□□□ -1.71
USP11P51784 U6.106-201ENST00000636360 105 ntBASIC4.37□□□□□ -1.71
USP11P51784 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms