Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
MRE11P49959 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.94□□□□□ -1.78
MRE11P49959 AC034102.8-201ENST00000615146 484 ntBASIC3.94□□□□□ -1.78
MRE11P49959 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.94□□□□□ -1.78
MRE11P49959 AL031601.2-202ENST00000622650 282 ntBASIC3.94□□□□□ -1.78
MRE11P49959 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MRE11P49959 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.94□□□□□ -1.78
MRE11P49959 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MRE11P49959 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.94□□□□□ -1.78
MRE11P49959 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.93□□□□□ -1.78
MRE11P49959 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MRE11P49959 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.93□□□□□ -1.78
MRE11P49959 Y_RNA.47-201ENST00000362697 108 ntBASIC3.93□□□□□ -1.78
MRE11P49959 RNU6-7-201ENST00000364784 107 ntBASIC3.93□□□□□ -1.78
MRE11P49959 RNU1-115P-201ENST00000365329 160 ntBASIC3.93□□□□□ -1.78
MRE11P49959 RNU6-8-201ENST00000365467 107 ntBASIC3.93□□□□□ -1.78
MRE11P49959 Y_RNA.428-201ENST00000384078 102 ntBASIC3.93□□□□□ -1.78
MRE11P49959 Y_RNA.455-201ENST00000384230 98 ntBASIC3.93□□□□□ -1.78
MRE11P49959 RNU6-842P-201ENST00000384269 107 ntBASIC3.93□□□□□ -1.78
MRE11P49959 U3.19-201ENST00000390893 196 ntBASIC3.93□□□□□ -1.78
MRE11P49959 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.93□□□□□ -1.78
MRE11P49959 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.93□□□□□ -1.78
MRE11P49959 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.93□□□□□ -1.78
MRE11P49959 HMGB1P9-201ENST00000429856 646 ntBASIC3.93□□□□□ -1.78
MRE11P49959 AL121890.1-201ENST00000435457 205 ntBASIC3.93□□□□□ -1.78
MRE11P49959 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.93□□□□□ -1.78
MRE11P49959 TRAPPC2P8-201ENST00000440676 396 ntBASIC3.93□□□□□ -1.78
MRE11P49959 AL731563.1-201ENST00000442202 214 ntBASIC3.93□□□□□ -1.78
MRE11P49959 HSPE1P6-201ENST00000479457 291 ntBASIC3.93□□□□□ -1.78
MRE11P49959 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.93□□□□□ -1.78
MRE11P49959 SUMO2P6-201ENST00000505273 288 ntBASIC3.93□□□□□ -1.78
MRE11P49959 HMGB1P22-201ENST00000505315 124 ntBASIC3.93□□□□□ -1.78
MRE11P49959 AC116655.1-201ENST00000508324 901 ntBASIC3.93□□□□□ -1.78
MRE11P49959 SNORD116.3-201ENST00000517176 78 ntBASIC3.93□□□□□ -1.78
MRE11P49959 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.93□□□□□ -1.78
MRE11P49959 SYF2P1-201ENST00000550658 413 ntBASIC3.93□□□□□ -1.78
MRE11P49959 AC110588.1-201ENST00000559699 137 ntBASIC3.93□□□□□ -1.78
MRE11P49959 LRRC37A5P-203ENST00000580181 585 ntBASIC3.93□□□□□ -1.78
MRE11P49959 MIR4506-201ENST00000584693 77 ntBASIC3.93□□□□□ -1.78
MRE11P49959 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.93□□□□□ -1.78
MRE11P49959 RNU6-85P-201ENST00000605989 107 ntBASIC3.93□□□□□ -1.78
MRE11P49959 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.93□□□□□ -1.78
MRE11P49959 U4.1-201ENST00000620349 87 ntBASIC3.93□□□□□ -1.78
MRE11P49959 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MRE11P49959 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.93□□□□□ -1.78
MRE11P49959 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
MRE11P49959 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MRE11P49959 Y_RNA.151-201ENST00000363566 112 ntBASIC3.92□□□□□ -1.78
MRE11P49959 RNU1-33P-201ENST00000364249 162 ntBASIC3.92□□□□□ -1.78
MRE11P49959 MIR591-201ENST00000385290 95 ntBASIC3.92□□□□□ -1.78
MRE11P49959 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
MRE11P49959 RNU6-907P-201ENST00000390924 102 ntBASIC3.92□□□□□ -1.78
MRE11P49959 Y_RNA.645-201ENST00000391229 102 ntBASIC3.92□□□□□ -1.78
MRE11P49959 RNU6-607P-201ENST00000411283 108 ntBASIC3.92□□□□□ -1.78
MRE11P49959 RN7SKP53-201ENST00000411337 315 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AL513331.1-201ENST00000411908 397 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC063979.1-201ENST00000415539 377 ntBASIC3.92□□□□□ -1.78
MRE11P49959 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.92□□□□□ -1.78
MRE11P49959 AC114482.1-201ENST00000418010 247 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC005300.1-201ENST00000428401 373 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC096644.2-201ENST00000429278 159 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC010285.1-201ENST00000470580 392 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.92□□□□□ -1.78
MRE11P49959 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.92□□□□□ -1.78
MRE11P49959 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.92□□□□□ -1.78
MRE11P49959 APOOP4-201ENST00000513530 597 ntBASIC3.92□□□□□ -1.78
MRE11P49959 RNA5SP385-201ENST00000515947 110 ntBASIC3.92□□□□□ -1.78
MRE11P49959 RNU6-307P-201ENST00000516743 106 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC104576.1-201ENST00000524225 88 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MRE11P49959 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.92□□□□□ -1.78
MRE11P49959 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.92□□□□□ -1.78
MRE11P49959 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.92□□□□□ -1.78
MRE11P49959 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.92□□□□□ -1.78
MRE11P49959 MIR4769-201ENST00000584126 77 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC005899.2-201ENST00000584353 90 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC104695.3-201ENST00000604052 296 ntBASIC3.92□□□□□ -1.78
MRE11P49959 NUTF2P8-201ENST00000604593 363 ntBASIC3.92□□□□□ -1.78
MRE11P49959 RNU1-30P-201ENST00000606575 163 ntBASIC3.92□□□□□ -1.78
MRE11P49959 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.92□□□□□ -1.78
MRE11P49959 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
MRE11P49959 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
MRE11P49959 MFSD8-233ENST00000641482 4860 ntBASIC3.92□□□□□ -1.78
MRE11P49959 CDC27P3-201ENST00000635418 1910 ntBASIC3.91□□□□□ -1.78
MRE11P49959 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.91□□□□□ -1.78
MRE11P49959 AL353746.1-201ENST00000566293 6881 ntBASIC3.91□□□□□ -1.78
MRE11P49959 UBE2L2-201ENST00000254302 429 ntBASIC3.91□□□□□ -1.78
MRE11P49959 Y_RNA.153-201ENST00000363615 91 ntBASIC3.91□□□□□ -1.78
MRE11P49959 RNA5SP51-201ENST00000364750 119 ntBASIC3.91□□□□□ -1.78
MRE11P49959 SNORA51.4-201ENST00000364993 124 ntBASIC3.91□□□□□ -1.78
MRE11P49959 SNORA41-201ENST00000384675 132 ntBASIC3.91□□□□□ -1.78
MRE11P49959 MIR517A-201ENST00000385001 87 ntBASIC3.91□□□□□ -1.78
MRE11P49959 SNORD73A-201ENST00000386062 65 ntBASIC3.91□□□□□ -1.78
MRE11P49959 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
MRE11P49959 MIR1302-3-201ENST00000408128 138 ntBASIC3.91□□□□□ -1.78
MRE11P49959 RN7SKP123-201ENST00000410732 291 ntBASIC3.91□□□□□ -1.78
MRE11P49959 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.91□□□□□ -1.78
MRE11P49959 CYCSP33-201ENST00000414485 327 ntBASIC3.91□□□□□ -1.78
MRE11P49959 AC093151.1-201ENST00000427711 313 ntBASIC3.91□□□□□ -1.78
MRE11P49959 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms