Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC104850.1-201ENST00000435940 476 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 HMGB1P31-201ENST00000437242 427 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 FABP5P14-201ENST00000437273 393 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 MTND6P13-201ENST00000443510 523 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 AC011005.2-201ENST00000487324 359 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC010486.2-201ENST00000505572 483 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
CXCL12P48061 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.71□□□□□ -2.14
CXCL12P48061 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 SNORA25.11-201ENST00000515935 105 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 SCARNA3-201ENST00000517097 143 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 RNA5SP490-201ENST00000517141 136 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.71□□□□□ -2.14
CXCL12P48061 AC060788.1-201ENST00000521318 469 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC010186.2-204ENST00000537668 439 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC145350.1-201ENST00000567426 208 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC025678.1-201ENST00000567861 338 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 MIR4765-201ENST00000585007 77 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC005771.1-201ENST00000585581 349 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 APOOP1-201ENST00000604695 592 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC126118.1-201ENST00000607744 628 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AL603755.1-201ENST00000619504 163 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC024940.5-201ENST00000622889 474 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AP000770.2-201ENST00000623694 100 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 AC120349.3-201ENST00000624377 529 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
CXCL12P48061 CKAP2P1-201ENST00000555477 2049 ntBASIC1.71□□□□□ -2.14
CXCL12P48061 CENPCP1-201ENST00000533085 2578 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 TEX21P-201ENST00000447107 1476 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CXCL12P48061 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
CXCL12P48061 Y_RNA.22-201ENST00000362492 102 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RNU4-21P-201ENST00000362802 126 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 U8.3-201ENST00000363321 132 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 Y_RNA.224-201ENST00000364308 111 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RNY4P34-201ENST00000364779 95 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RNA5SP37-201ENST00000365420 130 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RNU5A-2P-201ENST00000384337 116 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 MIR518D-201ENST00000385014 87 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 MT-TH-201ENST00000387441 69 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 SNORA46.1-201ENST00000391069 153 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RPS3AP36-201ENST00000398190 775 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RNU2-40P-201ENST00000410833 196 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RPS3AP3-201ENST00000411933 242 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AL356379.1-201ENST00000414105 126 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
CXCL12P48061 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL12P48061 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.7□□□□□ -2.14
CXCL12P48061 RPL30P4-201ENST00000429309 333 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 MICF-203ENST00000432679 129 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 RPS24P1-201ENST00000438550 371 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 RPS15AP9-201ENST00000439856 381 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL12P48061 AL078601.1-201ENST00000444542 271 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL12P48061 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 PPP1R2P5-201ENST00000457256 603 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AC023194.1-201ENST00000493084 308 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 RNU6-123P-201ENST00000516163 102 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 ACA59.2-201ENST00000517061 156 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.7□□□□□ -2.14
CXCL12P48061 DEFB131E-202ENST00000602581 683 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 uc_338.14-201ENST00000613162 166 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.7□□□□□ -2.14
CXCL12P48061 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
CXCL12P48061 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CXCL12P48061 AL603839.4-201ENST00000624658 1005 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 AP000553.5-201ENST00000641933 54 ntBASIC1.7□□□□□ -2.14
CXCL12P48061 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.7□□□□□ -2.14
CXCL12P48061 AP000568.1-201ENST00000282964 442 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
CXCL12P48061 SNORA20.2-201ENST00000383922 131 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 SNORA24.1-201ENST00000384401 135 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 MIR558-201ENST00000384920 94 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AL133475.1-201ENST00000404414 305 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 RNU2-39P-201ENST00000410604 198 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 RNU6-195P-201ENST00000411352 109 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC127391.1-201ENST00000411737 98 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL12P48061 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL12P48061 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL12P48061 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL12P48061 BTF3P15-201ENST00000455606 336 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AL583843.1-201ENST00000456070 346 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 RNA5SP233-201ENST00000459153 113 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 snoU13.18-201ENST00000459483 104 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.69□□□□□ -2.14
CXCL12P48061 SCARNA24.1-201ENST00000516465 137 ntBASIC1.69□□□□□ -2.14
CXCL12P48061 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms