Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC-0.04□□□□□ -2.42
HTTP42858 AL589743.7-201ENST00000612637 233 ntBASIC-0.04□□□□□ -2.42
HTTP42858 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.04□□□□□ -2.42
HTTP42858 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.04□□□□□ -2.42
HTTP42858 RNU5E-1-201ENST00000362477 120 ntBASIC-0.04□□□□□ -2.42
HTTP42858 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.04□□□□□ -2.42
HTTP42858 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
HTTP42858 RNU6-929P-201ENST00000384429 107 ntBASIC-0.04□□□□□ -2.42
HTTP42858 PTGES3P4-201ENST00000426243 356 ntBASIC-0.04□□□□□ -2.42
HTTP42858 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.04□□□□□ -2.42
HTTP42858 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 SNORA31.4-201ENST00000516049 129 ntBASIC-0.04□□□□□ -2.42
HTTP42858 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.04□□□□□ -2.42
HTTP42858 AC093788.1-201ENST00000609356 927 ntBASIC-0.04□□□□□ -2.42
HTTP42858 U4atac.1-201ENST00000618345 95 ntBASIC-0.04□□□□□ -2.42
HTTP42858 OR5AK4P-201ENST00000635912 903 ntBASIC-0.04□□□□□ -2.42
HTTP42858 Z75746.1-201ENST00000440243 2080 ntBASIC-0.05□□□□□ -2.42
HTTP42858 RNA5SP327-201ENST00000362494 101 ntBASIC-0.05□□□□□ -2.42
HTTP42858 RNU4-48P-201ENST00000365559 182 ntBASIC-0.05□□□□□ -2.42
HTTP42858 RNU2-36P-201ENST00000410361 191 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC092634.6-201ENST00000418558 192 ntBASIC-0.05□□□□□ -2.42
HTTP42858 MTCYBP3-201ENST00000445588 1137 ntBASIC-0.05□□□□□ -2.42
HTTP42858 snoU13.25-201ENST00000458945 104 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC048334.1-201ENST00000477975 159 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC-0.05□□□□□ -2.42
HTTP42858 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC-0.05□□□□□ -2.42
HTTP42858 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.05□□□□□ -2.42
HTTP42858 AL136520.1-202ENST00000555494 763 ntBASIC-0.05□□□□□ -2.42
HTTP42858 MIR4764-201ENST00000580680 88 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.05□□□□□ -2.42
HTTP42858 AC009233.1-201ENST00000616477 371 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC138393.1-203ENST00000327086 343 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AF228730.1-201ENST00000397972 663 ntBASIC-0.05□□□□□ -2.42
HTTP42858 SNORD99-201ENST00000408612 74 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC244098.3-201ENST00000424803 96 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC-0.05□□□□□ -2.42
HTTP42858 MTCO1P44-201ENST00000441935 243 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC-0.05□□□□□ -2.42
HTTP42858 snoU13.21-201ENST00000459368 105 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC022447.1-201ENST00000515358 464 ntBASIC-0.05□□□□□ -2.42
HTTP42858 RNA5SP137-201ENST00000516833 135 ntBASIC-0.05□□□□□ -2.42
HTTP42858 NRON-201ENST00000517270 370 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.05□□□□□ -2.42
HTTP42858 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC-0.05□□□□□ -2.42
HTTP42858 AC090578.1-201ENST00000604955 591 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC096586.2-201ENST00000610260 441 ntBASIC-0.05□□□□□ -2.42
HTTP42858 uc_338.34-201ENST00000617467 174 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AL158163.2-201ENST00000619110 700 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AC007490.1-201ENST00000624321 703 ntBASIC-0.05□□□□□ -2.42
HTTP42858 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC-0.05□□□□□ -2.42
HTTP42858 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
HTTP42858 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
HTTP42858 RNU6-1237P-201ENST00000384777 107 ntBASIC-0.06□□□□□ -2.42
HTTP42858 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AC104164.3-201ENST00000467363 1258 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AC079791.1-201ENST00000605356 973 ntBASIC-0.06□□□□□ -2.42
HTTP42858 RNU4-5P-201ENST00000607255 135 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AL359314.1-201ENST00000616913 261 ntBASIC-0.06□□□□□ -2.42
HTTP42858 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
HTTP42858 AL391994.1-201ENST00000254724 282 ntBASIC-0.06□□□□□ -2.42
HTTP42858 Y_RNA.255-201ENST00000364581 97 ntBASIC-0.06□□□□□ -2.42
HTTP42858 RNA5SP219-201ENST00000390940 113 ntBASIC-0.06□□□□□ -2.42
HTTP42858 SNORA16.2-201ENST00000390991 127 ntBASIC-0.06□□□□□ -2.42
HTTP42858 CALM2P3-201ENST00000400429 449 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AC024082.2-201ENST00000434771 238 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC-0.06□□□□□ -2.42
HTTP42858 AC055876.5-201ENST00000605667 259 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AC092106.3-201ENST00000611308 722 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AC008443.7-201ENST00000622195 246 ntBASIC-0.06□□□□□ -2.42
HTTP42858 AC106858.1-201ENST00000637497 429 ntBASIC-0.06□□□□□ -2.42
HTTP42858 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.06□□□□□ -2.42
HTTP42858 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
HTTP42858 RNA5SP128-201ENST00000365305 116 ntBASIC-0.07□□□□□ -2.42
HTTP42858 RNU6-1035P-201ENST00000384477 107 ntBASIC-0.07□□□□□ -2.42
HTTP42858 RNA5SP501-201ENST00000410990 112 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC-0.07□□□□□ -2.42
HTTP42858 HMGN2P34-201ENST00000437647 269 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AP1S2P1-201ENST00000457344 379 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AC010409.1-201ENST00000487382 476 ntBASIC-0.07□□□□□ -2.42
HTTP42858 MIR4290-201ENST00000583807 95 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AC091805.2-201ENST00000603848 235 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AC092953.2-201ENST00000608000 699 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC-0.07□□□□□ -2.42
HTTP42858 AC090625.1-201ENST00000357130 210 ntBASIC-0.07□□□□□ -2.42
HTTP42858 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.07□□□□□ -2.42
HTTP42858 RNU6-950P-201ENST00000384651 107 ntBASIC-0.07□□□□□ -2.42
HTTP42858 MIR95-201ENST00000385072 81 ntBASIC-0.07□□□□□ -2.42
HTTP42858 MIR325-201ENST00000385260 98 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC-0.07□□□□□ -2.42
HTTP42858 MTCO3P45-201ENST00000443036 613 ntBASIC-0.07□□□□□ -2.42
HTTP42858 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.07□□□□□ -2.42
HTTP42858 LARP1BP2-201ENST00000486594 519 ntBASIC-0.07□□□□□ -2.42
HTTP42858 PDCD5P2-201ENST00000507570 312 ntBASIC-0.07□□□□□ -2.42
HTTP42858 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC-0.07□□□□□ -2.42
HTTP42858 ADAM3B-201ENST00000569937 840 ntBASIC-0.07□□□□□ -2.42
HTTP42858 MIR942-201ENST00000401111 86 ntBASIC-0.07□□□□□ -2.42
HTTP42858 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC-0.07□□□□□ -2.42
HTTP42858 Z82210.1-201ENST00000440037 231 ntBASIC-0.07□□□□□ -2.42
HTTP42858 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.07□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms