Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LARP7P3-201ENST00000579888 337 ntBASIC2.64□□□□□ -1.99
HNF4AP41235 AC010525.2-201ENST00000590920 195 ntBASIC2.64□□□□□ -1.99
HNF4AP41235 AC130324.3-201ENST00000614165 542 ntBASIC2.64□□□□□ -1.99
HNF4AP41235 U6.114-201ENST00000636407 96 ntBASIC2.64□□□□□ -1.99
HNF4AP41235 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HNF4AP41235 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.64□□□□□ -1.99
HNF4AP41235 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.63□□□□□ -1.99
HNF4AP41235 RNU6-552P-201ENST00000362869 119 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 RNU1-112P-201ENST00000364401 164 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 RNU1-138P-201ENST00000384093 164 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.63□□□□□ -1.99
HNF4AP41235 AC007560.1-201ENST00000426912 237 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.63□□□□□ -1.99
HNF4AP41235 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.63□□□□□ -1.99
HNF4AP41235 MTCO3P18-201ENST00000440206 761 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 AL078601.1-201ENST00000444542 271 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 FABP5P13-201ENST00000452144 328 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 BTF3P15-201ENST00000455606 336 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.63□□□□□ -1.99
HNF4AP41235 DYNLL1P5-201ENST00000467158 270 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.63□□□□□ -1.99
HNF4AP41235 RNU6-123P-201ENST00000516163 102 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 RNU6-914P-201ENST00000516749 109 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 SNORA31.19-201ENST00000517079 126 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 AF235103.2-201ENST00000525753 346 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 AC079600.2-201ENST00000550076 130 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.63□□□□□ -1.99
HNF4AP41235 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.63□□□□□ -1.99
HNF4AP41235 AL160281.1-201ENST00000605307 311 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 DISC2.1-201ENST00000612827 205 ntBASIC2.63□□□□□ -1.99
HNF4AP41235 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.63□□□□□ -1.99
HNF4AP41235 RNU6-7-201ENST00000364784 107 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNA5SP125-201ENST00000364843 120 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNU6-867P-201ENST00000364956 107 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNU6-8-201ENST00000365467 107 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNU4-20P-201ENST00000365601 151 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 Z98749.2-208ENST00000381646 500 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNU6-876P-201ENST00000391295 104 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AL138827.1-201ENST00000402666 306 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RPS4XP7-201ENST00000406274 780 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNU2-29P-201ENST00000410423 189 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNA5SP21-201ENST00000410917 96 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC022028.1-201ENST00000412054 408 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC004383.1-201ENST00000438135 289 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.62□□□□□ -1.99
HNF4AP41235 MTND3P16-201ENST00000452205 344 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.62□□□□□ -1.99
HNF4AP41235 AC090525.1-201ENST00000479116 478 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 MTCYBP18-201ENST00000501056 747 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.62□□□□□ -1.99
HNF4AP41235 MTCO3P9-201ENST00000506989 781 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.62□□□□□ -1.99
HNF4AP41235 AC116655.1-201ENST00000508324 901 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 ACA59.2-201ENST00000517061 156 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 RNU6-685P-201ENST00000517088 95 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.62□□□□□ -1.99
HNF4AP41235 EIF4BP1-201ENST00000554881 351 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AL121579.1-201ENST00000555129 305 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AL157871.3-201ENST00000557231 293 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.62□□□□□ -1.99
HNF4AP41235 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.62□□□□□ -1.99
HNF4AP41235 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
HNF4AP41235 AC060780.3-201ENST00000589464 80 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AL158032.1-201ENST00000605401 106 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC012409.4-201ENST00000612923 249 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
HNF4AP41235 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC024581.2-201ENST00000619986 252 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
HNF4AP41235 AC244517.12-201ENST00000623581 663 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
HNF4AP41235 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.62□□□□□ -1.99
HNF4AP41235 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
HNF4AP41235 AC103710.2-202ENST00000641454 2853 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 RNU6-1287P-201ENST00000362914 107 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 RNU6-525P-201ENST00000363685 104 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HNF4AP41235 RNU6-1060P-201ENST00000384664 107 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 MIR592-201ENST00000384959 97 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 RNU6-550P-201ENST00000391057 101 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 RNU6-332P-201ENST00000391193 108 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 RNU6-1025P-201ENST00000410629 104 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.61□□□□□ -1.99
HNF4AP41235 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.61□□□□□ -1.99
HNF4AP41235 AC003685.2-201ENST00000422795 395 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.61□□□□□ -1.99
HNF4AP41235 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.61□□□□□ -1.99
HNF4AP41235 AC112220.1-201ENST00000434628 355 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.61□□□□□ -1.99
HNF4AP41235 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.61□□□□□ -1.99
HNF4AP41235 RNU7-180P-201ENST00000459240 63 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 MRPL42P6-201ENST00000486397 371 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 AC018437.1-201ENST00000492214 406 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 AC018710.1-201ENST00000506509 158 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 RN7SKP132-201ENST00000516001 208 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 SNORA20.3-201ENST00000516880 132 ntBASIC2.61□□□□□ -1.99
HNF4AP41235 SNORD60.2-201ENST00000516883 86 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms