Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 NRBF2P5-201ENST00000603087 788 ntBASIC2.44□□□□□ -2.02
SOX3P41225 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.44□□□□□ -2.02
SOX3P41225 AC092608.2-201ENST00000624427 218 ntBASIC2.44□□□□□ -2.02
SOX3P41225 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SOX3P41225 ADAM3A-203ENST00000461344 2157 ntBASIC2.44□□□□□ -2.02
SOX3P41225 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SOX3P41225 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX3P41225 Y_RNA.167-201ENST00000363735 109 ntBASIC2.43□□□□□ -2.02
SOX3P41225 Y_RNA.324-201ENST00000365165 102 ntBASIC2.43□□□□□ -2.02
SOX3P41225 Y_RNA.378-201ENST00000365652 113 ntBASIC2.43□□□□□ -2.02
SOX3P41225 RNA5SP210-201ENST00000391034 120 ntBASIC2.43□□□□□ -2.02
SOX3P41225 U3.37-201ENST00000408528 213 ntBASIC2.43□□□□□ -2.02
SOX3P41225 RNU2-49P-201ENST00000410666 184 ntBASIC2.43□□□□□ -2.02
SOX3P41225 POLHP1-201ENST00000411806 470 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC096649.2-201ENST00000416186 393 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC016831.2-201ENST00000417179 352 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX3P41225 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX3P41225 PGBD4P6-201ENST00000421501 610 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.43□□□□□ -2.02
SOX3P41225 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX3P41225 RPL23AP58-201ENST00000440453 469 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.43□□□□□ -2.02
SOX3P41225 Y_RNA.654-201ENST00000497848 106 ntBASIC2.43□□□□□ -2.02
SOX3P41225 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.43□□□□□ -2.02
SOX3P41225 RAC1P5-201ENST00000512182 576 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AL117351.2-201ENST00000513571 157 ntBASIC2.43□□□□□ -2.02
SOX3P41225 RNU6-1038P-201ENST00000516516 104 ntBASIC2.43□□□□□ -2.02
SOX3P41225 SNORD19.2-201ENST00000516978 73 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.43□□□□□ -2.02
SOX3P41225 HSPE1P20-201ENST00000538133 289 ntBASIC2.43□□□□□ -2.02
SOX3P41225 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.43□□□□□ -2.02
SOX3P41225 AC005498.1-201ENST00000592125 465 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC005261.5-201ENST00000596280 355 ntBASIC2.43□□□□□ -2.02
SOX3P41225 Z82243.1-201ENST00000609432 473 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AC103705.1-201ENST00000619013 241 ntBASIC2.43□□□□□ -2.02
SOX3P41225 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.43□□□□□ -2.02
SOX3P41225 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.43□□□□□ -2.02
SOX3P41225 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.43□□□□□ -2.02
SOX3P41225 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
SOX3P41225 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.43□□□□□ -2.02
SOX3P41225 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SOX3P41225 Z82195.2-201ENST00000612348 18351 ntBASIC2.43□□□□□ -2.02
SOX3P41225 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SOX3P41225 AC010889.1-201ENST00000566193 2666 ntBASIC2.42□□□□□ -2.02
SOX3P41225 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SOX3P41225 RNU6-522P-201ENST00000364497 107 ntBASIC2.42□□□□□ -2.02
SOX3P41225 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
SOX3P41225 RNU6-72P-201ENST00000384285 79 ntBASIC2.42□□□□□ -2.02
SOX3P41225 MIR767-201ENST00000390228 109 ntBASIC2.42□□□□□ -2.02
SOX3P41225 RNU6-332P-201ENST00000391193 108 ntBASIC2.42□□□□□ -2.02
SOX3P41225 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.42□□□□□ -2.02
SOX3P41225 RNA5SP118-201ENST00000410385 109 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 AL096701.2-201ENST00000416920 238 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.42□□□□□ -2.02
SOX3P41225 NFU1P2-201ENST00000448700 469 ntBASIC2.42□□□□□ -2.02
SOX3P41225 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX3P41225 RNU6-1208P-201ENST00000459588 107 ntBASIC2.42□□□□□ -2.02
SOX3P41225 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX3P41225 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.42□□□□□ -2.02
SOX3P41225 RPS27P27-201ENST00000498779 255 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 AC116655.1-201ENST00000508324 901 ntBASIC2.42□□□□□ -2.02
SOX3P41225 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 RNU6-189P-201ENST00000516120 101 ntBASIC2.42□□□□□ -2.02
SOX3P41225 RNU6-581P-201ENST00000516214 105 ntBASIC2.42□□□□□ -2.02
SOX3P41225 CYCSP27-201ENST00000527643 293 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.42□□□□□ -2.02
SOX3P41225 AL121821.2-201ENST00000556081 394 ntBASIC2.42□□□□□ -2.02
SOX3P41225 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 AC007151.1-201ENST00000572774 483 ntBASIC2.42□□□□□ -2.02
SOX3P41225 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SOX3P41225 VN1R80P-201ENST00000597126 338 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC002044.1-201ENST00000606707 158 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC092807.2-201ENST00000609367 243 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.42□□□□□ -2.02
SOX3P41225 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SOX3P41225 AC010378.1-201ENST00000619270 362 ntBASIC2.42□□□□□ -2.02
SOX3P41225 AC002064.3-201ENST00000623448 346 ntBASIC2.42□□□□□ -2.02
SOX3P41225 MIR3662-201ENST00000637030 95 ntBASIC2.42□□□□□ -2.02
SOX3P41225 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SOX3P41225 AC121333.1-201ENST00000567488 2709 ntBASIC2.41□□□□□ -2.02
SOX3P41225 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.41□□□□□ -2.02
SOX3P41225 AC099654.7-201ENST00000635788 2127 ntBASIC2.41□□□□□ -2.02
SOX3P41225 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SOX3P41225 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.41□□□□□ -2.02
SOX3P41225 SNORD62.1-201ENST00000362541 86 ntBASIC2.41□□□□□ -2.02
SOX3P41225 VTRNA1-1-201ENST00000363120 99 ntBASIC2.41□□□□□ -2.02
SOX3P41225 RNU6-1280P-201ENST00000365211 107 ntBASIC2.41□□□□□ -2.02
SOX3P41225 RNU1-100P-201ENST00000365255 165 ntBASIC2.41□□□□□ -2.02
SOX3P41225 RNA5SP219-201ENST00000390940 113 ntBASIC2.41□□□□□ -2.02
SOX3P41225 RAP1BP3-201ENST00000407180 549 ntBASIC2.41□□□□□ -2.02
SOX3P41225 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.41□□□□□ -2.02
SOX3P41225 RPLP0P7-201ENST00000416050 667 ntBASIC2.41□□□□□ -2.02
SOX3P41225 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.41□□□□□ -2.02
SOX3P41225 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 471.1 ms