Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.66□□□□□ -2.14
BRCA1P38398 RPL23AP3-201ENST00000453844 468 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.66□□□□□ -2.14
BRCA1P38398 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.66□□□□□ -2.14
BRCA1P38398 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.66□□□□□ -2.14
BRCA1P38398 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.66□□□□□ -2.14
BRCA1P38398 AC091152.3-201ENST00000604227 325 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 AC018638.7-201ENST00000605836 1114 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 RNU6-87P-201ENST00000607561 108 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 AL109620.1-201ENST00000618738 1197 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 AC013470.4-201ENST00000619978 986 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 AL162373.1-201ENST00000620433 407 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.66□□□□□ -2.14
BRCA1P38398 Z82195.2-201ENST00000612348 18351 ntBASIC1.66□□□□□ -2.14
BRCA1P38398 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
BRCA1P38398 U3.13-201ENST00000364804 214 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 RNU2-40P-201ENST00000410833 196 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.65□□□□□ -2.14
BRCA1P38398 AL022400.1-201ENST00000423946 935 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 HMGN2P19-201ENST00000425149 265 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.65□□□□□ -2.14
BRCA1P38398 HSFY7P-201ENST00000432672 318 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 HSFY8P-201ENST00000437934 318 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 SNRPGP13-201ENST00000442212 177 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 HSFY5P-201ENST00000453726 309 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 PMCHL2-203ENST00000457791 237 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC116655.1-201ENST00000508324 901 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.65□□□□□ -2.14
BRCA1P38398 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 Y_RNA.675-201ENST00000516389 149 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 RNU1-104P-201ENST00000517280 175 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.65□□□□□ -2.14
BRCA1P38398 ADI1P3-201ENST00000549509 470 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 ANP32BP3-201ENST00000559213 706 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC090888.2-201ENST00000559765 1144 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC090897.2-201ENST00000581715 130 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 AC005730.3-201ENST00000583067 366 ntBASIC1.65□□□□□ -2.14
BRCA1P38398 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.65□□□□□ -2.15
BRCA1P38398 RNU6-512P-201ENST00000364438 103 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 CIR1P3-201ENST00000405137 479 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 RNU6-1025P-201ENST00000410629 104 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.65□□□□□ -2.15
BRCA1P38398 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.65□□□□□ -2.15
BRCA1P38398 RPL23AP30-201ENST00000432419 501 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 RPS25P9-201ENST00000435591 252 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 MTND4LP16-201ENST00000440828 295 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 AC118469.1-201ENST00000442943 488 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 RPL23AP35-201ENST00000451906 501 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 AC055731.1-201ENST00000474387 401 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.65□□□□□ -2.15
BRCA1P38398 AC022493.1-201ENST00000492984 337 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 RNU6-1092P-201ENST00000516955 87 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 ACA59.2-201ENST00000517061 156 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 SNORA31.19-201ENST00000517079 126 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.65□□□□□ -2.15
BRCA1P38398 AC136619.2-201ENST00000563361 631 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 MTCO2P2-201ENST00000591258 225 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 AL391646.1-201ENST00000603860 190 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 ELOCP5-201ENST00000604924 333 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 AC027807.2-201ENST00000616099 408 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 MIR6134-201ENST00000617606 109 ntBASIC1.65□□□□□ -2.15
BRCA1P38398 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
BRCA1P38398 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.64□□□□□ -2.15
BRCA1P38398 RNU1-148P-201ENST00000384472 162 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 RNU6-584P-201ENST00000410350 95 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 AL030996.1-201ENST00000411430 235 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.64□□□□□ -2.15
BRCA1P38398 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.64□□□□□ -2.15
BRCA1P38398 MTND1P32-201ENST00000433043 938 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.64□□□□□ -2.15
BRCA1P38398 AC004223.1-201ENST00000479840 271 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 RPS3AP22-201ENST00000488297 769 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 AC091951.3-201ENST00000504093 246 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 AC109927.2-201ENST00000506416 303 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.64□□□□□ -2.15
BRCA1P38398 AC011979.2-201ENST00000527568 352 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 MIR4285-201ENST00000581001 85 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.64□□□□□ -2.15
BRCA1P38398 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
BRCA1P38398 RNU6-1210P-201ENST00000363775 107 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA1P38398 MIR122-201ENST00000385044 85 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 PIGPP2-201ENST00000411569 458 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.63□□□□□ -2.15
BRCA1P38398 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA1P38398 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.63□□□□□ -2.15
BRCA1P38398 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.63□□□□□ -2.15
BRCA1P38398 CYP2C59P-201ENST00000457790 269 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 AC022878.1-201ENST00000530684 149 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 ELOCP32-201ENST00000548625 324 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA1P38398 AL161722.3-201ENST00000605789 2983 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 AL031775.1-201ENST00000607014 887 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 AL391834.2-201ENST00000609982 546 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.63□□□□□ -2.15
BRCA1P38398 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
BRCA1P38398 AC138627.2-201ENST00000624202 601 ntBASIC1.63□□□□□ -2.15
BRCA1P38398 AP000560.1-201ENST00000624150 1937 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms