Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF4P23510 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF4P23510 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AC104619.4-201ENST00000510773 249 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 PHBP14-201ENST00000512887 367 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 RN7SKP24-201ENST00000515888 284 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 RNU6-579P-201ENST00000516879 102 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF4P23510 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF4P23510 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AC027176.1-201ENST00000560204 514 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AC008739.3-201ENST00000603262 127 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 U3.45-201ENST00000607547 219 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 RMST_8.1-201ENST00000610287 165 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 AC006133.1-201ENST00000617106 264 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 AL159153.1-201ENST00000619688 317 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFSF4P23510 AC099654.5-201ENST00000636479 350 ntBASIC3.06□□□□□ -1.92
TNFSF4P23510 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.06□□□□□ -1.92
TNFSF4P23510 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF4P23510 Y_RNA.263-201ENST00000364659 114 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 SNORD32A-201ENST00000364805 84 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RNU6-43P-201ENST00000384302 107 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RNA5SP44-201ENST00000410446 133 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RPL37P10-201ENST00000412884 288 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RPS29P4-201ENST00000414733 161 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF4P23510 RPL23AP95-201ENST00000426806 265 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 MTND3P9-201ENST00000429526 346 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AL353705.1-201ENST00000433468 480 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RPS3AP52-201ENST00000435639 297 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RPS12P18-201ENST00000442381 270 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.05□□□□□ -1.92
TNFSF4P23510 AC080013.2-201ENST00000460866 323 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RPS29P27-201ENST00000463711 170 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RPL21P129-201ENST00000491732 478 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC116337.1-201ENST00000509680 687 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 RNU6-507P-201ENST00000516045 100 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC105029.1-201ENST00000520250 669 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF4P23510 MIR1254-2-201ENST00000579553 63 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 MIR3158-1-201ENST00000583596 81 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC078795.3-201ENST00000602913 472 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC006557.5-201ENST00000603126 811 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC009994.1-201ENST00000606889 253 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.05□□□□□ -1.92
TNFSF4P23510 MIR6128-201ENST00000615528 109 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 AC039056.2-201ENST00000622261 511 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF4P23510 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.05□□□□□ -1.92
TNFSF4P23510 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF4P23510 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TNFSF4P23510 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
TNFSF4P23510 AP000560.1-201ENST00000624150 1937 ntBASIC3.05□□□□□ -1.92
TNFSF4P23510 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
TNFSF4P23510 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
TNFSF4P23510 MTND4P27-201ENST00000450813 1354 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 SNORD9-201ENST00000362566 104 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 RNA5SP124-201ENST00000362739 110 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 RNU6-529P-201ENST00000363383 104 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 RNU6-867P-201ENST00000364956 107 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 SET-203ENST00000372688 801 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF4P23510 MIR521-1-201ENST00000384902 87 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 SNORA48.7-201ENST00000391302 135 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 Y_RNA.604-201ENST00000410574 102 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 RN7SKP61-201ENST00000410642 295 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 SYF2P2-201ENST00000417620 583 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 EIF4EP4-201ENST00000424916 578 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 RPL30P4-201ENST00000429309 333 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF4P23510 NDUFB1P1-201ENST00000435191 180 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF4P23510 AL031659.1-201ENST00000447075 539 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 Y_RNA.635-201ENST00000459041 101 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 RPS26P21-201ENST00000475397 348 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.04□□□□□ -1.92
TNFSF4P23510 RPL23AP70-201ENST00000483361 460 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 AC106707.2-201ENST00000484182 374 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 AC023141.11-201ENST00000508864 202 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 PTP4A1P4-201ENST00000512479 322 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 SNORA25.11-201ENST00000515935 105 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 ACA59.1-201ENST00000515966 143 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFSF4P23510 AC007991.1-201ENST00000522680 631 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.04□□□□□ -1.92
TNFSF4P23510 IMMP1LP2-201ENST00000552954 492 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 AC105245.1-201ENST00000581934 244 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.04□□□□□ -1.92
TNFSF4P23510 POLR3GP2-201ENST00000588366 668 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.04□□□□□ -1.92
TNFSF4P23510 AC069294.1-201ENST00000608397 350 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.04□□□□□ -1.92
TNFSF4P23510 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.04□□□□□ -1.92
TNFSF4P23510 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
TNFSF4P23510 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.03□□□□□ -1.92
TNFSF4P23510 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms