Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH1P12830 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH1P12830 NIPA2P5-201ENST00000452282 464 ntBASIC2.76□□□□□ -1.97
CDH1P12830 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH1P12830 AC233279.1-201ENST00000455300 423 ntBASIC2.76□□□□□ -1.97
CDH1P12830 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH1P12830 AC092798.1-201ENST00000458542 409 ntBASIC2.76□□□□□ -1.97
CDH1P12830 MTND4P17-201ENST00000470444 350 ntBASIC2.76□□□□□ -1.97
CDH1P12830 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH1P12830 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH1P12830 AC079140.5-201ENST00000507882 310 ntBASIC2.76□□□□□ -1.97
CDH1P12830 AC008526.1-201ENST00000509149 338 ntBASIC2.76□□□□□ -1.97
CDH1P12830 SNORA74D-201ENST00000516404 141 ntBASIC2.76□□□□□ -1.97
CDH1P12830 RNU6-928P-201ENST00000516876 104 ntBASIC2.76□□□□□ -1.97
CDH1P12830 RNA5SP454-201ENST00000517231 127 ntBASIC2.76□□□□□ -1.97
CDH1P12830 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.76□□□□□ -1.97
CDH1P12830 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH1P12830 AP005639.2-201ENST00000527592 928 ntBASIC2.76□□□□□ -1.97
CDH1P12830 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH1P12830 AL355375.2-201ENST00000574825 175 ntBASIC2.76□□□□□ -1.97
CDH1P12830 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
CDH1P12830 POLR3GP2-201ENST00000588366 668 ntBASIC2.76□□□□□ -1.97
CDH1P12830 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.76□□□□□ -1.97
CDH1P12830 HSPE1P7-201ENST00000604681 321 ntBASIC2.76□□□□□ -1.97
CDH1P12830 APOOP1-201ENST00000604695 592 ntBASIC2.76□□□□□ -1.97
CDH1P12830 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.76□□□□□ -1.97
CDH1P12830 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CDH1P12830 AC096644.4-201ENST00000563417 2912 ntBASIC2.75□□□□□ -1.97
CDH1P12830 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CDH1P12830 AC138393.1-203ENST00000327086 343 ntBASIC2.75□□□□□ -1.97
CDH1P12830 Y_RNA.11-201ENST00000362375 109 ntBASIC2.75□□□□□ -1.97
CDH1P12830 Y_RNA.813-201ENST00000364639 102 ntBASIC2.75□□□□□ -1.97
CDH1P12830 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.75□□□□□ -1.97
CDH1P12830 SNORA1.3-201ENST00000384676 136 ntBASIC2.75□□□□□ -1.97
CDH1P12830 MIR512-1-201ENST00000384913 84 ntBASIC2.75□□□□□ -1.97
CDH1P12830 RPL7P37-201ENST00000425095 738 ntBASIC2.75□□□□□ -1.97
CDH1P12830 SKA2P1-201ENST00000425592 390 ntBASIC2.75□□□□□ -1.97
CDH1P12830 HMGB1P9-201ENST00000429856 646 ntBASIC2.75□□□□□ -1.97
CDH1P12830 AL139132.1-201ENST00000431587 344 ntBASIC2.75□□□□□ -1.97
CDH1P12830 RNU7-138P-201ENST00000459479 64 ntBASIC2.75□□□□□ -1.97
CDH1P12830 AC104472.2-201ENST00000469035 601 ntBASIC2.75□□□□□ -1.97
CDH1P12830 RN7SL297P-201ENST00000483161 293 ntBASIC2.75□□□□□ -1.97
CDH1P12830 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.75□□□□□ -1.97
CDH1P12830 Y_RNA.675-201ENST00000516389 149 ntBASIC2.75□□□□□ -1.97
CDH1P12830 RNU6-1332P-201ENST00000516666 104 ntBASIC2.75□□□□□ -1.97
CDH1P12830 AC087854.1-201ENST00000519706 414 ntBASIC2.75□□□□□ -1.97
CDH1P12830 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.75□□□□□ -1.97
CDH1P12830 ELOCP31-201ENST00000540463 467 ntBASIC2.75□□□□□ -1.97
CDH1P12830 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
CDH1P12830 HMGB1P14-201ENST00000557424 591 ntBASIC2.75□□□□□ -1.97
CDH1P12830 AC138761.3-201ENST00000579993 334 ntBASIC2.75□□□□□ -1.97
CDH1P12830 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.75□□□□□ -1.97
CDH1P12830 ZNF519P1-201ENST00000449011 1626 ntBASIC2.75□□□□□ -1.97
CDH1P12830 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH1P12830 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH1P12830 RNU6-128P-201ENST00000383976 107 ntBASIC2.74□□□□□ -1.97
CDH1P12830 UBA52P6-201ENST00000399822 382 ntBASIC2.74□□□□□ -1.97
CDH1P12830 MIR548F5-201ENST00000408421 86 ntBASIC2.74□□□□□ -1.97
CDH1P12830 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH1P12830 MTND4P28-201ENST00000426217 387 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC007560.1-201ENST00000426912 237 ntBASIC2.74□□□□□ -1.97
CDH1P12830 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDH1P12830 AL627311.1-201ENST00000431514 115 ntBASIC2.74□□□□□ -1.97
CDH1P12830 RPL23AP83-201ENST00000434984 473 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AL359672.1-201ENST00000442302 409 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AL078601.1-201ENST00000444542 271 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AL590664.1-201ENST00000448065 339 ntBASIC2.74□□□□□ -1.97
CDH1P12830 MTND1P17-201ENST00000448961 204 ntBASIC2.74□□□□□ -1.97
CDH1P12830 MTND5P5-201ENST00000503764 376 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC069113.1-201ENST00000517763 267 ntBASIC2.74□□□□□ -1.97
CDH1P12830 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH1P12830 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH1P12830 AP005597.4-201ENST00000526762 229 ntBASIC2.74□□□□□ -1.97
CDH1P12830 HPRT1P3-201ENST00000539521 576 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC025423.5-201ENST00000550230 219 ntBASIC2.74□□□□□ -1.97
CDH1P12830 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.74□□□□□ -1.97
CDH1P12830 AL451007.1-201ENST00000595491 289 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.74□□□□□ -1.97
CDH1P12830 NUTF2P8-201ENST00000604593 363 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC123912.5-201ENST00000605470 343 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC093732.2-201ENST00000607950 274 ntBASIC2.74□□□□□ -1.97
CDH1P12830 AC135507.2-201ENST00000612443 309 ntBASIC2.74□□□□□ -1.97
CDH1P12830 MIR6076-201ENST00000617521 113 ntBASIC2.74□□□□□ -1.97
CDH1P12830 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH1P12830 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH1P12830 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH1P12830 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDH1P12830 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.74□□□□□ -1.97
CDH1P12830 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.73□□□□□ -1.97
CDH1P12830 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.73□□□□□ -1.97
CDH1P12830 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
CDH1P12830 AC006026.1-201ENST00000444025 1803 ntBASIC2.73□□□□□ -1.97
CDH1P12830 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
CDH1P12830 Y_RNA.58-201ENST00000362807 102 ntBASIC2.73□□□□□ -1.97
CDH1P12830 Y_RNA.154-201ENST00000363624 102 ntBASIC2.73□□□□□ -1.97
CDH1P12830 RNY3P1-201ENST00000365085 102 ntBASIC2.73□□□□□ -1.97
CDH1P12830 RNY3-201ENST00000365484 102 ntBASIC2.73□□□□□ -1.97
CDH1P12830 Z98749.2-208ENST00000381646 500 ntBASIC2.73□□□□□ -1.97
CDH1P12830 Y_RNA.490-201ENST00000384413 102 ntBASIC2.73□□□□□ -1.97
CDH1P12830 MIR10A-201ENST00000385043 110 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms