Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MIR103A1-201ENST00000362165 78 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 RPL26P27-201ENST00000414397 437 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 NCOR1P3-201ENST00000420479 303 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC-0.48□□□□□ -2.49
TOP2AP11388 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC-0.48□□□□□ -2.49
TOP2AP11388 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC-0.48□□□□□ -2.49
TOP2AP11388 AL512310.8-201ENST00000550183 120 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 AP002826.1-201ENST00000608835 315 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 MIR5739-201ENST00000619803 80 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 SNORA25B-201ENST00000365507 128 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 MT-TC-201ENST00000387405 66 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 RNA5SP56-201ENST00000410277 118 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC-0.48□□□□□ -2.49
TOP2AP11388 RAC1P8-201ENST00000427086 527 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.48□□□□□ -2.49
TOP2AP11388 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC-0.48□□□□□ -2.49
TOP2AP11388 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.48□□□□□ -2.49
TOP2AP11388 MIR548AX-201ENST00000580117 73 ntBASIC-0.48□□□□□ -2.49
TOP2AP11388 AC092125.1-201ENST00000562568 1995 ntBASIC-0.49□□□□□ -2.49
TOP2AP11388 SNORD115-3-201ENST00000363100 82 ntBASIC-0.49□□□□□ -2.49
TOP2AP11388 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.49□□□□□ -2.49
TOP2AP11388 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC-0.49□□□□□ -2.49
TOP2AP11388 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC-0.49□□□□□ -2.49
TOP2AP11388 MTND1P22-201ENST00000510572 951 ntBASIC-0.49□□□□□ -2.49
TOP2AP11388 AC016065.2-201ENST00000514530 444 ntBASIC-0.49□□□□□ -2.49
TOP2AP11388 SCARNA8-201ENST00000515924 131 ntBASIC-0.49□□□□□ -2.49
TOP2AP11388 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.49□□□□□ -2.49
TOP2AP11388 DUXAP1-201ENST00000556632 463 ntBASIC-0.49□□□□□ -2.49
TOP2AP11388 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.49□□□□□ -2.49
TOP2AP11388 MTND5P30-201ENST00000452896 1731 ntBASIC-0.5□□□□□ -2.49
TOP2AP11388 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.5□□□□□ -2.49
TOP2AP11388 RNU6-877P-201ENST00000383868 107 ntBASIC-0.5□□□□□ -2.49
TOP2AP11388 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.5□□□□□ -2.49
TOP2AP11388 AC243964.1-201ENST00000441814 261 ntBASIC-0.5□□□□□ -2.49
TOP2AP11388 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC-0.5□□□□□ -2.49
TOP2AP11388 LARP1BP2-201ENST00000486594 519 ntBASIC-0.5□□□□□ -2.49
TOP2AP11388 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.5□□□□□ -2.49
TOP2AP11388 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC-0.5□□□□□ -2.49
TOP2AP11388 RSL24D1P11-201ENST00000591045 491 ntBASIC-0.5□□□□□ -2.49
TOP2AP11388 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC-0.5□□□□□ -2.49
TOP2AP11388 UBE2Q2P1-202ENST00000354771 883 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 Y_RNA.324-201ENST00000365165 102 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 RNA5SP128-201ENST00000365305 116 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 RNA5SP219-201ENST00000390940 113 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 MIR942-201ENST00000401111 86 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.51□□□□□ -2.49
TOP2AP11388 RAB11AP1-201ENST00000442978 646 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 AL034418.1-201ENST00000448675 860 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 AL049830.1-201ENST00000468034 425 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 AC105758.1-201ENST00000506038 399 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 SNORA31.17-201ENST00000516953 127 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.51□□□□□ -2.49
TOP2AP11388 AL121579.1-201ENST00000555129 305 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.51□□□□□ -2.49
TOP2AP11388 AL031667.3-201ENST00000620124 655 ntBASIC-0.51□□□□□ -2.49
TOP2AP11388 MIR644A-201ENST00000385262 94 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 RNU6-750P-201ENST00000390946 107 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC-0.52□□□□□ -2.49
TOP2AP11388 AC006548.1-201ENST00000427470 102 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC-0.52□□□□□ -2.49
TOP2AP11388 AC233266.1-201ENST00000454518 96 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 AC113410.1-201ENST00000505029 247 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 TRAPPC2P7-201ENST00000509650 231 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 AC010587.2-201ENST00000511727 448 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 ARL2BPP5-201ENST00000523141 481 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 AC007151.1-201ENST00000572774 483 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 AC242852.1-201ENST00000612151 96 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 AC244015.1-201ENST00000622301 99 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 CR381572.1-201ENST00000625098 102 ntBASIC-0.52□□□□□ -2.49
TOP2AP11388 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC-0.52□□□□□ -2.49
TOP2AP11388 RNU6-532P-201ENST00000384318 107 ntBASIC-0.53□□□□□ -2.49
TOP2AP11388 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
TOP2AP11388 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.53□□□□□ -2.49
TOP2AP11388 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC-0.53□□□□□ -2.49
TOP2AP11388 HMGN1P12-201ENST00000499125 195 ntBASIC-0.53□□□□□ -2.49
TOP2AP11388 HMGN1P13-201ENST00000505795 138 ntBASIC-0.53□□□□□ -2.49
TOP2AP11388 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC-0.53□□□□□ -2.49
TOP2AP11388 HSPA8P13-201ENST00000523715 472 ntBASIC-0.53□□□□□ -2.49
TOP2AP11388 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.53□□□□□ -2.49
TOP2AP11388 AC012557.2-201ENST00000605919 418 ntBASIC-0.53□□□□□ -2.49
TOP2AP11388 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.53□□□□□ -2.49
TOP2AP11388 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.53□□□□□ -2.49
TOP2AP11388 MT-TQ-201ENST00000387372 72 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 AL161935.2-201ENST00000414627 60 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 MTND4LP11-201ENST00000422184 280 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 AC002429.1-201ENST00000437672 148 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 RN7SKP287-201ENST00000516546 266 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 AC104417.1-201ENST00000523974 751 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC-0.54□□□□□ -2.5
TOP2AP11388 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.54□□□□□ -2.5
TOP2AP11388 AC009237.15-201ENST00000610252 501 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 AC024581.2-201ENST00000619986 252 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 RNA5SP275-201ENST00000363936 118 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
TOP2AP11388 RNA5SP451-201ENST00000410588 110 ntBASIC-0.54□□□□□ -2.5
TOP2AP11388 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC-0.54□□□□□ -2.5
TOP2AP11388 MED14P1-201ENST00000430517 648 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms