Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CBX3P6-201ENST00000430257 527 ntBASIC1.4□□□□□ -2.19
TPM1P09493 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.4□□□□□ -2.19
TPM1P09493 SNORD13-201ENST00000459299 104 ntBASIC1.4□□□□□ -2.19
TPM1P09493 AC087477.1-201ENST00000465747 340 ntBASIC1.4□□□□□ -2.19
TPM1P09493 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.4□□□□□ -2.19
TPM1P09493 RPL30P1-201ENST00000488676 339 ntBASIC1.4□□□□□ -2.19
TPM1P09493 MTCYBP18-201ENST00000501056 747 ntBASIC1.4□□□□□ -2.19
TPM1P09493 RNU1-41P-201ENST00000516161 162 ntBASIC1.4□□□□□ -2.19
TPM1P09493 RNU1-48P-201ENST00000516400 162 ntBASIC1.4□□□□□ -2.19
TPM1P09493 RNU1-92P-201ENST00000517017 135 ntBASIC1.4□□□□□ -2.19
TPM1P09493 AC078795.2-201ENST00000602835 1252 ntBASIC1.4□□□□□ -2.19
TPM1P09493 BNIP3P19-201ENST00000605397 577 ntBASIC1.4□□□□□ -2.19
TPM1P09493 AC130454.1-201ENST00000622948 401 ntBASIC1.4□□□□□ -2.19
TPM1P09493 AP003476.1-201ENST00000623984 516 ntBASIC1.4□□□□□ -2.19
TPM1P09493 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.39□□□□□ -2.19
TPM1P09493 snoU2_19.1-201ENST00000362361 80 ntBASIC1.39□□□□□ -2.19
TPM1P09493 RNU6-769P-201ENST00000384407 104 ntBASIC1.39□□□□□ -2.19
TPM1P09493 SNORD116-20-201ENST00000384529 92 ntBASIC1.39□□□□□ -2.19
TPM1P09493 AC092809.3-201ENST00000415453 231 ntBASIC1.39□□□□□ -2.19
TPM1P09493 RPL32P28-201ENST00000443577 397 ntBASIC1.39□□□□□ -2.19
TPM1P09493 snoU109.2-201ENST00000459316 135 ntBASIC1.39□□□□□ -2.19
TPM1P09493 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.39□□□□□ -2.19
TPM1P09493 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.39□□□□□ -2.19
TPM1P09493 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.39□□□□□ -2.19
TPM1P09493 AC137800.2-201ENST00000574375 120 ntBASIC1.39□□□□□ -2.19
TPM1P09493 BCRP9-201ENST00000605312 388 ntBASIC1.39□□□□□ -2.19
TPM1P09493 ZNF209P-201ENST00000593450 2304 ntBASIC1.39□□□□□ -2.19
TPM1P09493 AC092104.1-201ENST00000497346 1441 ntBASIC1.39□□□□□ -2.19
TPM1P09493 MIR412-201ENST00000362142 91 ntBASIC1.38□□□□□ -2.19
TPM1P09493 RNU6-190P-201ENST00000384154 102 ntBASIC1.38□□□□□ -2.19
TPM1P09493 SNORD116-12-201ENST00000384468 92 ntBASIC1.38□□□□□ -2.19
TPM1P09493 Y_RNA.597-201ENST00000410463 100 ntBASIC1.38□□□□□ -2.19
TPM1P09493 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.38□□□□□ -2.19
TPM1P09493 AL627311.1-201ENST00000431514 115 ntBASIC1.38□□□□□ -2.19
TPM1P09493 DUXAP8-207ENST00000456786 622 ntBASIC1.38□□□□□ -2.19
TPM1P09493 YWHAEP4-201ENST00000505390 198 ntBASIC1.38□□□□□ -2.19
TPM1P09493 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM1P09493 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM1P09493 AL356057.1-201ENST00000533798 831 ntBASIC1.38□□□□□ -2.19
TPM1P09493 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.38□□□□□ -2.19
TPM1P09493 MIR544B-201ENST00000582372 78 ntBASIC1.38□□□□□ -2.19
TPM1P09493 AL022154.1-201ENST00000604698 785 ntBASIC1.38□□□□□ -2.19
TPM1P09493 AC072039.2-201ENST00000608883 439 ntBASIC1.38□□□□□ -2.19
TPM1P09493 AC006386.1-201ENST00000619436 415 ntBASIC1.38□□□□□ -2.19
TPM1P09493 AC007792.1-201ENST00000623023 402 ntBASIC1.38□□□□□ -2.19
TPM1P09493 Y_RNA.192-201ENST00000363977 102 ntBASIC1.37□□□□□ -2.19
TPM1P09493 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TPM1P09493 MIR1267-201ENST00000408723 78 ntBASIC1.37□□□□□ -2.19
TPM1P09493 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TPM1P09493 CYCSP49-201ENST00000420810 319 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM1P09493 RPS15AP10-201ENST00000432472 382 ntBASIC1.37□□□□□ -2.19
TPM1P09493 CR769776.1-201ENST00000441254 787 ntBASIC1.37□□□□□ -2.19
TPM1P09493 CALM1P1-201ENST00000442082 433 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.37□□□□□ -2.19
TPM1P09493 NDUFB1P2-201ENST00000449477 176 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM1P09493 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM1P09493 RPS26P55-201ENST00000471178 356 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AC119751.4-201ENST00000507498 357 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AC116353.3-201ENST00000511215 249 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM1P09493 AP003033.1-201ENST00000527244 415 ntBASIC1.37□□□□□ -2.19
TPM1P09493 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
TPM1P09493 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM1P09493 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.37□□□□□ -2.19
TPM1P09493 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TPM1P09493 AC005668.1-201ENST00000571142 476 ntBASIC1.37□□□□□ -2.19
TPM1P09493 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AC005786.1-201ENST00000588553 154 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AL158211.2-201ENST00000607282 395 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AL590240.4-201ENST00000616908 390 ntBASIC1.37□□□□□ -2.19
TPM1P09493 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.37□□□□□ -2.19
TPM1P09493 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
TPM1P09493 RNU6-414P-201ENST00000363705 104 ntBASIC1.36□□□□□ -2.19
TPM1P09493 ERHP2-201ENST00000402323 299 ntBASIC1.36□□□□□ -2.19
TPM1P09493 RNU2-62P-201ENST00000410868 191 ntBASIC1.36□□□□□ -2.19
TPM1P09493 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM1P09493 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.36□□□□□ -2.19
TPM1P09493 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM1P09493 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TPM1P09493 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.36□□□□□ -2.19
TPM1P09493 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM1P09493 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM1P09493 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.36□□□□□ -2.19
TPM1P09493 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
TPM1P09493 RNU6-1092P-201ENST00000516955 87 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AP004247.1-201ENST00000531556 1289 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AC022022.2-201ENST00000602989 360 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AL050343.2-201ENST00000607338 280 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AL355816.2-201ENST00000610049 647 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AL159153.1-201ENST00000619688 317 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AL121890.5-201ENST00000620848 304 ntBASIC1.36□□□□□ -2.19
TPM1P09493 AC024940.5-201ENST00000622889 474 ntBASIC1.36□□□□□ -2.19
TPM1P09493 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.36□□□□□ -2.19
TPM1P09493 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
TPM1P09493 RNU6-511P-201ENST00000363496 107 ntBASIC1.35□□□□□ -2.19
TPM1P09493 RNY3P13-201ENST00000365542 102 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms