Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.71□□□□□ -2.3
CXCL1P09341 RNU6-968P-201ENST00000384076 107 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.71□□□□□ -2.3
CXCL1P09341 BTF3P4-201ENST00000418852 495 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 TIMM9P2-201ENST00000419324 266 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 SNRPEP10-201ENST00000420249 274 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.71□□□□□ -2.3
CXCL1P09341 PGBD4P5-201ENST00000445958 426 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AL606517.1-201ENST00000446914 387 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RPL31P3-201ENST00000458430 332 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RNU7-95P-201ENST00000459222 64 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 SNORA59A-201ENST00000459326 152 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 snoU13.26-201ENST00000459452 105 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RPL9P9-202ENST00000466501 579 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC103851.1-201ENST00000506833 274 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RPL23AP94-201ENST00000512518 302 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.71□□□□□ -2.3
CXCL1P09341 RNU6-991P-201ENST00000516168 107 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 RNU6-150P-201ENST00000516237 95 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.71□□□□□ -2.3
CXCL1P09341 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.71□□□□□ -2.3
CXCL1P09341 AC104072.1-201ENST00000568817 668 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC015688.6-201ENST00000577737 104 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
CXCL1P09341 MIR3937-201ENST00000580135 106 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.71□□□□□ -2.3
CXCL1P09341 AC022022.2-201ENST00000602989 360 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC013244.2-201ENST00000603396 103 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 AC078880.5-201ENST00000617845 421 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 MTND5P33-201ENST00000571250 1450 ntBASIC0.71□□□□□ -2.3
CXCL1P09341 SNORD114-6-201ENST00000364393 72 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 RNU6-26P-201ENST00000383985 107 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 RNU6-1065P-201ENST00000384513 106 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 Y_RNA.534-201ENST00000384599 112 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 RNA5SP390-201ENST00000410191 113 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.7□□□□□ -2.3
CXCL1P09341 AC013410.2-201ENST00000422627 201 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.7□□□□□ -2.3
CXCL1P09341 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.7□□□□□ -2.3
CXCL1P09341 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.7□□□□□ -2.3
CXCL1P09341 AC012308.1-201ENST00000451232 178 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AL353752.1-201ENST00000454946 260 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AC130509.1-201ENST00000464158 433 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AC087343.1-201ENST00000477341 475 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 HMGB1P30-201ENST00000492455 606 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 RNU6-1315P-201ENST00000517187 99 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.7□□□□□ -2.3
CXCL1P09341 AL356057.1-201ENST00000533798 831 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
CXCL1P09341 CYP3A52P-201ENST00000563326 91 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.7□□□□□ -2.3
CXCL1P09341 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.7□□□□□ -2.3
CXCL1P09341 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.7□□□□□ -2.3
CXCL1P09341 MIR6078-201ENST00000611069 100 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AC018926.1-201ENST00000616335 435 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 AC099654.5-201ENST00000636479 350 ntBASIC0.7□□□□□ -2.3
CXCL1P09341 MTND5P35-201ENST00000557537 1720 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.69□□□□□ -2.3
CXCL1P09341 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.69□□□□□ -2.3
CXCL1P09341 Y_RNA.408-201ENST00000383987 102 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AC016831.2-201ENST00000417179 352 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.69□□□□□ -2.3
CXCL1P09341 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.69□□□□□ -2.3
CXCL1P09341 RNU6-953P-201ENST00000459154 107 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.69□□□□□ -2.3
CXCL1P09341 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CXCL1P09341 MTND1P36-201ENST00000522384 936 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 DEFB130C-202ENST00000530001 230 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.69□□□□□ -2.3
CXCL1P09341 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
CXCL1P09341 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.69□□□□□ -2.3
CXCL1P09341 AP003465.2-201ENST00000602571 373 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AC112220.3-201ENST00000605502 502 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 MIR8065-201ENST00000620577 100 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AC027335.2-201ENST00000624030 375 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AL512643.1-201ENST00000635735 524 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 AC241585.2-209ENST00000638217 143 ntBASIC0.69□□□□□ -2.3
CXCL1P09341 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.69□□□□□ -2.3
CXCL1P09341 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CXCL1P09341 RNU1-17P-201ENST00000363022 152 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 MRPL35P1-201ENST00000404272 572 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC083875.1-201ENST00000419509 405 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.68□□□□□ -2.3
CXCL1P09341 AL953862.1-201ENST00000423016 168 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CXCL1P09341 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.68□□□□□ -2.3
CXCL1P09341 RPS15AP10-201ENST00000432472 382 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.68□□□□□ -2.3
CXCL1P09341 MTND4P25-201ENST00000441039 533 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 NEFMP1-201ENST00000443423 1006 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 PRPS1P1-201ENST00000445305 876 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CXCL1P09341 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.68□□□□□ -2.3
CXCL1P09341 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.68□□□□□ -2.3
CXCL1P09341 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.68□□□□□ -2.3
CXCL1P09341 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CXCL1P09341 RNY4P37-201ENST00000516225 96 ntBASIC0.68□□□□□ -2.3
CXCL1P09341 AC100821.1-201ENST00000523153 2479 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms