Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
RAF1P04049 ADAM3A-203ENST00000461344 2157 ntBASIC2.6□□□□□ -1.99
RAF1P04049 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAF1P04049 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAF1P04049 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RAF1P04049 Y_RNA.33-201ENST00000362591 102 ntBASIC2.6□□□□□ -1.99
RAF1P04049 Y_RNA.72-201ENST00000362894 103 ntBASIC2.6□□□□□ -1.99
RAF1P04049 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.6□□□□□ -1.99
RAF1P04049 SNORD67-201ENST00000390833 111 ntBASIC2.6□□□□□ -1.99
RAF1P04049 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.6□□□□□ -1.99
RAF1P04049 MYL8P-204ENST00000431574 518 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC098614.3-201ENST00000438957 440 ntBASIC2.6□□□□□ -1.99
RAF1P04049 PRPS1P1-201ENST00000445305 876 ntBASIC2.6□□□□□ -1.99
RAF1P04049 MTATP6P7-201ENST00000453315 681 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AP000705.1-201ENST00000454567 350 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC007547.1-201ENST00000462177 490 ntBASIC2.6□□□□□ -1.99
RAF1P04049 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.6□□□□□ -1.99
RAF1P04049 RPS29P26-201ENST00000477483 171 ntBASIC2.6□□□□□ -1.99
RAF1P04049 MTND3P25-201ENST00000509243 135 ntBASIC2.6□□□□□ -1.99
RAF1P04049 FAM206BP-201ENST00000510179 541 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC112206.3-201ENST00000514578 389 ntBASIC2.6□□□□□ -1.99
RAF1P04049 SCGB1D5P-201ENST00000515134 247 ntBASIC2.6□□□□□ -1.99
RAF1P04049 RNU6-507P-201ENST00000516045 100 ntBASIC2.6□□□□□ -1.99
RAF1P04049 RNU6-703P-201ENST00000516946 107 ntBASIC2.6□□□□□ -1.99
RAF1P04049 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.6□□□□□ -1.99
RAF1P04049 AC025755.1-201ENST00000521306 278 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC107953.1-201ENST00000522216 297 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAF1P04049 AC090115.3-201ENST00000553218 849 ntBASIC2.6□□□□□ -1.99
RAF1P04049 PSMA3P-201ENST00000555485 635 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.6□□□□□ -1.99
RAF1P04049 MIR5692A1-201ENST00000580523 69 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.6□□□□□ -1.99
RAF1P04049 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.6□□□□□ -1.99
RAF1P04049 AC011712.1-201ENST00000588959 234 ntBASIC2.6□□□□□ -1.99
RAF1P04049 BNIP3P25-201ENST00000596023 559 ntBASIC2.6□□□□□ -1.99
RAF1P04049 VN1R80P-201ENST00000597126 338 ntBASIC2.6□□□□□ -1.99
RAF1P04049 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC092747.3-201ENST00000603769 301 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC007938.3-201ENST00000604965 623 ntBASIC2.6□□□□□ -1.99
RAF1P04049 CTHRC1P1-201ENST00000605383 469 ntBASIC2.6□□□□□ -1.99
RAF1P04049 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.6□□□□□ -1.99
RAF1P04049 AC007318.2-201ENST00000620999 243 ntBASIC2.6□□□□□ -1.99
RAF1P04049 AC022418.1-201ENST00000624118 445 ntBASIC2.6□□□□□ -1.99
RAF1P04049 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.6□□□□□ -1.99
RAF1P04049 MIR3199-2-201ENST00000636243 86 ntBASIC2.6□□□□□ -1.99
RAF1P04049 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RAF1P04049 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RAF1P04049 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.59□□□□□ -1.99
RAF1P04049 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.59□□□□□ -1.99
RAF1P04049 AL161431.1-201ENST00000618966 4205 ntBASIC2.59□□□□□ -1.99
RAF1P04049 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RAF1P04049 RNU1-35P-201ENST00000362782 153 ntBASIC2.59□□□□□ -1.99
RAF1P04049 SNORD3E-201ENST00000362899 217 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RNU6-1303P-201ENST00000364841 107 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RNU6-395P-201ENST00000365662 106 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RNU6-851P-201ENST00000384565 107 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RNA5SP219-201ENST00000390940 113 ntBASIC2.59□□□□□ -1.99
RAF1P04049 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RAF1P04049 AL139095.1-201ENST00000404326 391 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.59□□□□□ -1.99
RAF1P04049 NUP35P1-201ENST00000422734 947 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AL513185.2-201ENST00000425543 193 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AL358075.3-201ENST00000426289 226 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC007560.1-201ENST00000426912 237 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC098831.1-201ENST00000440661 216 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2.59□□□□□ -1.99
RAF1P04049 USP9YP8-201ENST00000441913 500 ntBASIC2.59□□□□□ -1.99
RAF1P04049 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.59□□□□□ -1.99
RAF1P04049 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.59□□□□□ -1.99
RAF1P04049 RNU7-167P-201ENST00000459160 62 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RPL31P41-201ENST00000477967 372 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC091951.2-201ENST00000500762 203 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RNU6-189P-201ENST00000516120 101 ntBASIC2.59□□□□□ -1.99
RAF1P04049 RNU6-572P-201ENST00000516724 80 ntBASIC2.59□□□□□ -1.99
RAF1P04049 Y_RNA.702-201ENST00000516843 96 ntBASIC2.59□□□□□ -1.99
RAF1P04049 BTF3P12-201ENST00000519620 469 ntBASIC2.59□□□□□ -1.99
RAF1P04049 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.59□□□□□ -1.99
RAF1P04049 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.59□□□□□ -1.99
RAF1P04049 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
RAF1P04049 AC010620.2-201ENST00000600135 313 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC019159.1-201ENST00000605094 187 ntBASIC2.59□□□□□ -1.99
RAF1P04049 ATP1B3P1-201ENST00000605365 821 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC021646.1-201ENST00000605469 484 ntBASIC2.59□□□□□ -1.99
RAF1P04049 Z82243.1-201ENST00000609432 473 ntBASIC2.59□□□□□ -1.99
RAF1P04049 U2.17-201ENST00000611454 95 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC022306.2-201ENST00000617563 647 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC103705.1-201ENST00000619013 241 ntBASIC2.59□□□□□ -1.99
RAF1P04049 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.59□□□□□ -1.99
RAF1P04049 AC009248.2-201ENST00000619826 254 ntBASIC2.59□□□□□ -1.99
RAF1P04049 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -1.99
RAF1P04049 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.59□□□□□ -2
RAF1P04049 AC121333.1-201ENST00000567488 2709 ntBASIC2.59□□□□□ -2
RAF1P04049 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.59□□□□□ -2
RAF1P04049 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.59□□□□□ -2
RAF1P04049 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RAF1P04049 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.58□□□□□ -2
RAF1P04049 AC138915.1-201ENST00000565427 1685 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms