Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.32□□□□□ -2.04
MT-ND1P03886 USP9YP28-201ENST00000435142 589 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AC107083.1-201ENST00000439643 279 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.32□□□□□ -2.04
MT-ND1P03886 MTND3P16-201ENST00000452205 344 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AL583843.1-201ENST00000456070 346 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND1P03886 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND1P03886 AC080013.2-201ENST00000460866 323 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RPS29P25-201ENST00000481709 171 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 MTAPP1-201ENST00000489154 819 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
MT-ND1P03886 AC096725.1-201ENST00000514266 313 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNU2-69P-201ENST00000516061 100 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RNU6-1038P-201ENST00000516516 104 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 SNORA31.11-201ENST00000516528 139 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AC109635.3-201ENST00000529536 185 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 MIR5571-201ENST00000577998 113 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AP000907.4-201ENST00000604143 237 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AC069294.1-201ENST00000608397 350 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RMST_3.1-201ENST00000611651 109 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.32□□□□□ -2.04
MT-ND1P03886 AP003400.5-201ENST00000624827 617 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.32□□□□□ -2.04
MT-ND1P03886 U6.99-201ENST00000637524 83 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AC024614.3-201ENST00000637860 256 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MT-ND1P03886 AC093536.2-201ENST00000565257 1406 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.32□□□□□ -2.04
MT-ND1P03886 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
MT-ND1P03886 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
MT-ND1P03886 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MT-ND1P03886 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
MT-ND1P03886 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 Y_RNA.453-201ENST00000384223 109 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 RNU6-45P-201ENST00000384471 107 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 MIR128-1-201ENST00000384921 82 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AL606923.1-201ENST00000406616 190 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 SNORA11-201ENST00000408789 128 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 RNU2-3P-201ENST00000410144 191 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 CYCSP33-201ENST00000414485 327 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.31□□□□□ -2.04
MT-ND1P03886 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.31□□□□□ -2.04
MT-ND1P03886 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.31□□□□□ -2.04
MT-ND1P03886 FABP5P14-201ENST00000437273 393 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 SEPT14P3-201ENST00000439401 183 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AL732372.2-207ENST00000445840 183 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 FGF7P6-202ENST00000451282 293 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 SEPT14P2-201ENST00000453405 183 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AL441985.1-201ENST00000457727 251 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AP000852.1-201ENST00000472460 573 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AC069439.1-201ENST00000494739 167 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.31□□□□□ -2.04
MT-ND1P03886 SEPT14P4-201ENST00000513445 186 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.31□□□□□ -2.04
MT-ND1P03886 FO082796.1-201ENST00000523795 183 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.31□□□□□ -2.04
MT-ND1P03886 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.31□□□□□ -2.04
MT-ND1P03886 BNIP3P6-201ENST00000549284 499 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 MIR4446-201ENST00000578505 67 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AC010525.2-201ENST00000590920 195 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 AC068944.2-201ENST00000610373 403 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.31□□□□□ -2.04
MT-ND1P03886 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.31□□□□□ -2.04
MT-ND1P03886 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
MT-ND1P03886 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.31□□□□□ -2.04
MT-ND1P03886 AL359854.1-201ENST00000614203 1594 ntBASIC2.31□□□□□ -2.04
MT-ND1P03886 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
MT-ND1P03886 RNU6-859P-201ENST00000362728 107 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 SNORA67.1-201ENST00000364749 141 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 Y_RNA.295-201ENST00000364918 102 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 RNU1-52P-201ENST00000384190 164 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 RNU6-393P-201ENST00000384475 107 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 MIR518D-201ENST00000385014 87 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 MIR514A2-201ENST00000385131 88 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 MIR514A3-201ENST00000385132 88 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 RPS4XP7-201ENST00000406274 780 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 OR9R1P-201ENST00000412200 877 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 AL353621.1-201ENST00000418219 243 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.3□□□□□ -2.04
MT-ND1P03886 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC2.3□□□□□ -2.04
MT-ND1P03886 BX276092.3-201ENST00000424182 230 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 AC007560.1-201ENST00000426912 237 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.3□□□□□ -2.04
MT-ND1P03886 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 MTCO3P38-201ENST00000468910 766 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.3□□□□□ -2.04
MT-ND1P03886 AF213884.2-201ENST00000510417 903 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 AC104136.1-201ENST00000512969 394 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 RNA5SP112-201ENST00000515937 99 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 RN7SKP132-201ENST00000516001 208 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 AC078814.3-201ENST00000553036 491 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.3□□□□□ -2.04
MT-ND1P03886 MIR4782-201ENST00000577987 79 ntBASIC2.3□□□□□ -2.04
MT-ND1P03886 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.3□□□□□ -2.04
MT-ND1P03886 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms