Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.43□□□□□ -2.18
VAPBO95292 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPBO95292 SNRPGP13-201ENST00000442212 177 ntBASIC1.43□□□□□ -2.18
VAPBO95292 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VAPBO95292 ZNF736P4Y-201ENST00000454995 1243 ntBASIC1.43□□□□□ -2.18
VAPBO95292 HMGN2P23-201ENST00000456759 269 ntBASIC1.43□□□□□ -2.18
VAPBO95292 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.43□□□□□ -2.18
VAPBO95292 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.43□□□□□ -2.18
VAPBO95292 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
VAPBO95292 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.43□□□□□ -2.18
VAPBO95292 AL355816.2-201ENST00000610049 647 ntBASIC1.43□□□□□ -2.18
VAPBO95292 U6.42-201ENST00000618440 107 ntBASIC1.43□□□□□ -2.18
VAPBO95292 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.43□□□□□ -2.18
VAPBO95292 SCARNA4-202ENST00000625402 129 ntBASIC1.43□□□□□ -2.18
VAPBO95292 AC004808.1-201ENST00000627671 721 ntBASIC1.43□□□□□ -2.18
VAPBO95292 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
VAPBO95292 MIR424-201ENST00000362227 98 ntBASIC1.42□□□□□ -2.18
VAPBO95292 Y_RNA.46-201ENST00000362695 102 ntBASIC1.42□□□□□ -2.18
VAPBO95292 RNU6-942P-201ENST00000363002 107 ntBASIC1.42□□□□□ -2.18
VAPBO95292 RNU6-1164P-201ENST00000364428 107 ntBASIC1.42□□□□□ -2.18
VAPBO95292 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.42□□□□□ -2.18
VAPBO95292 RNU6-622P-201ENST00000384272 103 ntBASIC1.42□□□□□ -2.18
VAPBO95292 MIR10A-201ENST00000385043 110 ntBASIC1.42□□□□□ -2.18
VAPBO95292 RNA5SP390-201ENST00000410191 113 ntBASIC1.42□□□□□ -2.18
VAPBO95292 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.42□□□□□ -2.18
VAPBO95292 AL590556.1-201ENST00000423231 483 ntBASIC1.42□□□□□ -2.18
VAPBO95292 RPL23AP30-201ENST00000432419 501 ntBASIC1.42□□□□□ -2.18
VAPBO95292 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.42□□□□□ -2.18
VAPBO95292 FDX1P2-201ENST00000450769 375 ntBASIC1.42□□□□□ -2.18
VAPBO95292 AC119751.4-201ENST00000507498 357 ntBASIC1.42□□□□□ -2.18
VAPBO95292 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.42□□□□□ -2.18
VAPBO95292 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.42□□□□□ -2.18
VAPBO95292 WISP1-OT1-201ENST00000602893 642 ntBASIC1.42□□□□□ -2.18
VAPBO95292 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
VAPBO95292 AC007792.1-201ENST00000623023 402 ntBASIC1.42□□□□□ -2.18
VAPBO95292 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.42□□□□□ -2.18
VAPBO95292 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.41□□□□□ -2.18
VAPBO95292 CBX3P1-201ENST00000325243 554 ntBASIC1.41□□□□□ -2.18
VAPBO95292 OR4G2P-201ENST00000328113 903 ntBASIC1.41□□□□□ -2.18
VAPBO95292 U8.1-201ENST00000362843 134 ntBASIC1.41□□□□□ -2.18
VAPBO95292 Y_RNA.99-201ENST00000363138 105 ntBASIC1.41□□□□□ -2.18
VAPBO95292 RNU6-433P-201ENST00000363216 104 ntBASIC1.41□□□□□ -2.18
VAPBO95292 RNU6-944P-201ENST00000364023 107 ntBASIC1.41□□□□□ -2.18
VAPBO95292 RNU6-960P-201ENST00000364056 120 ntBASIC1.41□□□□□ -2.18
VAPBO95292 SNORA67.5-201ENST00000391036 107 ntBASIC1.41□□□□□ -2.18
VAPBO95292 RNU6-174P-201ENST00000410406 106 ntBASIC1.41□□□□□ -2.18
VAPBO95292 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.41□□□□□ -2.18
VAPBO95292 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.41□□□□□ -2.18
VAPBO95292 VN1R108P-201ENST00000431580 830 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AL591806.2-201ENST00000433122 173 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.41□□□□□ -2.18
VAPBO95292 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.41□□□□□ -2.18
VAPBO95292 AC018630.3-201ENST00000542637 96 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VAPBO95292 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.41□□□□□ -2.18
VAPBO95292 AC069431.2-201ENST00000604149 1099 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AC112187.2-201ENST00000604345 283 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AL022154.1-201ENST00000604698 785 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AC121334.2-201ENST00000605387 271 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AC144521.1-201ENST00000607148 956 ntBASIC1.41□□□□□ -2.18
VAPBO95292 AL359547.2-201ENST00000615810 418 ntBASIC1.41□□□□□ -2.18
VAPBO95292 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
VAPBO95292 ZNF680P1-201ENST00000436625 1469 ntBASIC1.4□□□□□ -2.19
VAPBO95292 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
VAPBO95292 RNU1-17P-201ENST00000363022 152 ntBASIC1.4□□□□□ -2.19
VAPBO95292 RNU6-23P-201ENST00000363283 107 ntBASIC1.4□□□□□ -2.19
VAPBO95292 RNU4-92P-201ENST00000363783 136 ntBASIC1.4□□□□□ -2.19
VAPBO95292 SNORA75B-201ENST00000384053 137 ntBASIC1.4□□□□□ -2.19
VAPBO95292 TOMM20P4-201ENST00000427861 435 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AL008629.1-201ENST00000438615 184 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPBO95292 CALM1P1-201ENST00000442082 433 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.4□□□□□ -2.19
VAPBO95292 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPBO95292 snoU13.14-201ENST00000459372 104 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC021146.2-201ENST00000504736 556 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPBO95292 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPBO95292 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPBO95292 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.4□□□□□ -2.19
VAPBO95292 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
VAPBO95292 AL353778.1-201ENST00000603149 408 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC018645.2-201ENST00000609151 472 ntBASIC1.4□□□□□ -2.19
VAPBO95292 RMST_6.1-201ENST00000611980 203 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC021755.4-201ENST00000616620 456 ntBASIC1.4□□□□□ -2.19
VAPBO95292 AC130454.1-201ENST00000622948 401 ntBASIC1.4□□□□□ -2.19
VAPBO95292 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.4□□□□□ -2.19
VAPBO95292 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
VAPBO95292 snoU2_19.1-201ENST00000362361 80 ntBASIC1.39□□□□□ -2.19
VAPBO95292 SNORD3E-201ENST00000362899 217 ntBASIC1.39□□□□□ -2.19
VAPBO95292 RNU6-338P-201ENST00000383888 105 ntBASIC1.39□□□□□ -2.19
VAPBO95292 SNORA48.1-201ENST00000390879 135 ntBASIC1.39□□□□□ -2.19
VAPBO95292 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.39□□□□□ -2.19
VAPBO95292 NCOR1P3-201ENST00000420479 303 ntBASIC1.39□□□□□ -2.19
VAPBO95292 NDUFB1P2-201ENST00000449477 176 ntBASIC1.39□□□□□ -2.19
VAPBO95292 AP001025.1-201ENST00000486139 332 ntBASIC1.39□□□□□ -2.19
VAPBO95292 MTCYBP35-201ENST00000503630 1137 ntBASIC1.39□□□□□ -2.19
VAPBO95292 AC123904.2-201ENST00000548059 300 ntBASIC1.39□□□□□ -2.19
VAPBO95292 MIR4303-201ENST00000581299 66 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms