Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AP001486.3-201ENST00000615334 372 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC021755.4-201ENST00000616620 456 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AC091965.5-201ENST00000624785 342 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 AL161722.3-201ENST00000605789 2983 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
NPHP4O75161 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.68□□□□□ -2.14
NPHP4O75161 RNY3P13-201ENST00000365542 102 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 SNORA4.3-201ENST00000365564 137 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 RNU6-906P-201ENST00000384700 70 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.67□□□□□ -2.14
NPHP4O75161 SNORD56-201ENST00000413522 71 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC108059.3-201ENST00000456388 214 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 PMCHL2-203ENST00000457791 237 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 RPL39P36-201ENST00000490784 156 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 MRPS33P3-201ENST00000513456 322 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC118273.2-201ENST00000532092 465 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.67□□□□□ -2.14
NPHP4O75161 AC025678.1-201ENST00000567861 338 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 MIR4782-201ENST00000577987 79 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 VN1R82P-201ENST00000601481 356 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AL355297.2-201ENST00000604792 129 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AP000860.1-201ENST00000605250 559 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC106052.1-201ENST00000608029 497 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC130324.3-201ENST00000614165 542 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 AC013470.4-201ENST00000619978 986 ntBASIC1.67□□□□□ -2.14
NPHP4O75161 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.67□□□□□ -2.14
NPHP4O75161 RNU2-36P-201ENST00000410361 191 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 USP9YP24-201ENST00000434374 697 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 BRK1P2-201ENST00000442875 223 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 USP9YP17-201ENST00000444617 696 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.66□□□□□ -2.14
NPHP4O75161 MTND1P3-201ENST00000484956 952 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 RNU6-143P-201ENST00000516942 93 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 SNORA31.25-201ENST00000517242 134 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHP4O75161 AC023050.2-201ENST00000544968 387 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC123904.2-201ENST00000548059 300 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 CR383656.8-201ENST00000549046 145 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AL356432.3-201ENST00000568952 465 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC009974.1-201ENST00000608881 455 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AL607023.1-201ENST00000620045 248 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHP4O75161 AC103706.2-201ENST00000638080 240 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 MTND4P9-201ENST00000507819 1346 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.66□□□□□ -2.14
NPHP4O75161 Y_RNA.46-201ENST00000362695 102 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 SMIM11P1-201ENST00000369586 178 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 RNU6-83P-201ENST00000384568 112 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHP4O75161 RAC1P6-201ENST00000423911 575 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.66□□□□□ -2.14
NPHP4O75161 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 RNA5SP233-201ENST00000459153 113 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC055731.1-201ENST00000474387 401 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 RPL22P13-201ENST00000493291 347 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 SNORA31.19-201ENST00000517079 126 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC087854.1-201ENST00000519706 414 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHP4O75161 LINC00933-203ENST00000559812 219 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 SUB1P4-201ENST00000566062 339 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.66□□□□□ -2.14
NPHP4O75161 AC013244.3-201ENST00000605614 388 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 MIR6134-201ENST00000617606 109 ntBASIC1.66□□□□□ -2.14
NPHP4O75161 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.66□□□□□ -2.14
NPHP4O75161 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.66□□□□□ -2.14
NPHP4O75161 Y_RNA.178-201ENST00000363832 102 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 MIR216A-201ENST00000385063 110 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 ELOCP17-201ENST00000414751 326 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 AC092809.3-201ENST00000415453 231 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 EDDM3CP-201ENST00000415977 425 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 AL160275.3-201ENST00000423876 471 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.65□□□□□ -2.15
NPHP4O75161 MTND1P20-201ENST00000430341 950 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC1.65□□□□□ -2.15
NPHP4O75161 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.65□□□□□ -2.15
NPHP4O75161 AC023194.1-201ENST00000493084 308 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 MTCYBP35-201ENST00000503630 1137 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 SNORA4.4-201ENST00000515921 135 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 RNU6-405P-201ENST00000516637 110 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 DUXAP1-201ENST00000556632 463 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 MIR3146-201ENST00000580367 79 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 MIR4307-201ENST00000582802 84 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 MIR4295-201ENST00000585286 85 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 AC008749.1-201ENST00000597650 306 ntBASIC1.65□□□□□ -2.15
NPHP4O75161 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.65□□□□□ -2.15
NPHP4O75161 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
NPHP4O75161 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 RNU6-157P-201ENST00000383957 107 ntBASIC1.64□□□□□ -2.15
NPHP4O75161 RNU6-748P-201ENST00000384648 107 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms