Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.44□□□□□ -2.02
SNX3O60493 AC087884.1-201ENST00000469738 328 ntBASIC2.44□□□□□ -2.02
SNX3O60493 RPL7P43-201ENST00000478876 753 ntBASIC2.44□□□□□ -2.02
SNX3O60493 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.44□□□□□ -2.02
SNX3O60493 AC074250.1-201ENST00000511117 192 ntBASIC2.44□□□□□ -2.02
SNX3O60493 SNORA25.11-201ENST00000515935 105 ntBASIC2.44□□□□□ -2.02
SNX3O60493 CENPUP1-201ENST00000526649 1202 ntBASIC2.44□□□□□ -2.02
SNX3O60493 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.44□□□□□ -2.02
SNX3O60493 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.44□□□□□ -2.02
SNX3O60493 MIR4429-201ENST00000580105 73 ntBASIC2.44□□□□□ -2.02
SNX3O60493 MIR3117-201ENST00000584034 78 ntBASIC2.44□□□□□ -2.02
SNX3O60493 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.44□□□□□ -2.02
SNX3O60493 ATP1B3P1-201ENST00000605365 821 ntBASIC2.44□□□□□ -2.02
SNX3O60493 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SNX3O60493 FER-210ENST00000628534 558 ntTSL 5 BASIC2.44□□□□□ -2.02
SNX3O60493 AC068137.3-201ENST00000639191 341 ntBASIC2.44□□□□□ -2.02
SNX3O60493 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
SNX3O60493 AC073869.6-201ENST00000640656 341 ntBASIC2.44□□□□□ -2.02
SNX3O60493 RBBP8P1-201ENST00000449447 1844 ntBASIC2.44□□□□□ -2.02
SNX3O60493 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SNX3O60493 AL359854.1-201ENST00000614203 1594 ntBASIC2.44□□□□□ -2.02
SNX3O60493 AC010329.5-201ENST00000623497 2174 ntBASIC2.43□□□□□ -2.02
SNX3O60493 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SNX3O60493 SNORD56.5-201ENST00000364281 72 ntBASIC2.43□□□□□ -2.02
SNX3O60493 RNU5E-7P-201ENST00000365290 117 ntBASIC2.43□□□□□ -2.02
SNX3O60493 Y_RNA.378-201ENST00000365652 113 ntBASIC2.43□□□□□ -2.02
SNX3O60493 Y_RNA.402-201ENST00000383972 102 ntBASIC2.43□□□□□ -2.02
SNX3O60493 RNU6-843P-201ENST00000384454 104 ntBASIC2.43□□□□□ -2.02
SNX3O60493 SNORA41-201ENST00000384675 132 ntBASIC2.43□□□□□ -2.02
SNX3O60493 MIR218-1-201ENST00000384999 110 ntBASIC2.43□□□□□ -2.02
SNX3O60493 MIR34B-201ENST00000385076 84 ntBASIC2.43□□□□□ -2.02
SNX3O60493 MIR670-201ENST00000390142 98 ntBASIC2.43□□□□□ -2.02
SNX3O60493 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.43□□□□□ -2.02
SNX3O60493 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX3O60493 AC092427.1-202ENST00000430569 476 ntBASIC2.43□□□□□ -2.02
SNX3O60493 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX3O60493 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.43□□□□□ -2.02
SNX3O60493 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.43□□□□□ -2.02
SNX3O60493 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX3O60493 snoU13.22-201ENST00000459428 104 ntBASIC2.43□□□□□ -2.02
SNX3O60493 RPL21P99-201ENST00000480369 423 ntBASIC2.43□□□□□ -2.02
SNX3O60493 RPL36AP48-201ENST00000485521 314 ntBASIC2.43□□□□□ -2.02
SNX3O60493 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.43□□□□□ -2.02
SNX3O60493 SNORD60.2-201ENST00000516883 86 ntBASIC2.43□□□□□ -2.02
SNX3O60493 RPL7P20-201ENST00000520308 745 ntBASIC2.43□□□□□ -2.02
SNX3O60493 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.43□□□□□ -2.02
SNX3O60493 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX3O60493 AC109635.3-201ENST00000529536 185 ntBASIC2.43□□□□□ -2.02
SNX3O60493 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.43□□□□□ -2.02
SNX3O60493 MIR3199-1-201ENST00000582434 88 ntBASIC2.43□□□□□ -2.02
SNX3O60493 VN1R80P-201ENST00000597126 338 ntBASIC2.43□□□□□ -2.02
SNX3O60493 AC080078.2-201ENST00000603766 501 ntBASIC2.43□□□□□ -2.02
SNX3O60493 APOOP1-201ENST00000604695 592 ntBASIC2.43□□□□□ -2.02
SNX3O60493 YPEL5P2-201ENST00000605553 359 ntBASIC2.43□□□□□ -2.02
SNX3O60493 Z82243.1-201ENST00000609432 473 ntBASIC2.43□□□□□ -2.02
SNX3O60493 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
SNX3O60493 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.43□□□□□ -2.02
SNX3O60493 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.43□□□□□ -2.02
SNX3O60493 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.42□□□□□ -2.02
SNX3O60493 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
SNX3O60493 RNY4P14-201ENST00000363656 96 ntBASIC2.42□□□□□ -2.02
SNX3O60493 RNY3P3-201ENST00000363816 102 ntBASIC2.42□□□□□ -2.02
SNX3O60493 Y_RNA.450-201ENST00000384198 113 ntBASIC2.42□□□□□ -2.02
SNX3O60493 MIR514A2-201ENST00000385131 88 ntBASIC2.42□□□□□ -2.02
SNX3O60493 MIR514A3-201ENST00000385132 88 ntBASIC2.42□□□□□ -2.02
SNX3O60493 RNU6-1140P-201ENST00000410517 106 ntBASIC2.42□□□□□ -2.02
SNX3O60493 POLHP1-201ENST00000411806 470 ntBASIC2.42□□□□□ -2.02
SNX3O60493 WARS2P1-201ENST00000429678 537 ntBASIC2.42□□□□□ -2.02
SNX3O60493 MICF-203ENST00000432679 129 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AL513328.1-201ENST00000446460 224 ntBASIC2.42□□□□□ -2.02
SNX3O60493 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC006026.2-201ENST00000457376 180 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC112771.1-201ENST00000463581 102 ntBASIC2.42□□□□□ -2.02
SNX3O60493 RPL23AP45-201ENST00000476406 468 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AP001025.1-201ENST00000486139 332 ntBASIC2.42□□□□□ -2.02
SNX3O60493 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.42□□□□□ -2.02
SNX3O60493 MTCYBP40-201ENST00000509390 1135 ntBASIC2.42□□□□□ -2.02
SNX3O60493 HIGD1AP13-201ENST00000509878 289 ntBASIC2.42□□□□□ -2.02
SNX3O60493 SNORA31.23-201ENST00000517219 133 ntBASIC2.42□□□□□ -2.02
SNX3O60493 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SNX3O60493 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.42□□□□□ -2.02
SNX3O60493 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.42□□□□□ -2.02
SNX3O60493 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.42□□□□□ -2.02
SNX3O60493 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.42□□□□□ -2.02
SNX3O60493 MTND1P35-201ENST00000526739 508 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.42□□□□□ -2.02
SNX3O60493 AC023050.3-201ENST00000541142 333 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.42□□□□□ -2.02
SNX3O60493 AC010525.2-201ENST00000590920 195 ntBASIC2.42□□□□□ -2.02
SNX3O60493 NRBF2P5-201ENST00000603087 788 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC092747.3-201ENST00000603769 301 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC021646.1-201ENST00000605469 484 ntBASIC2.42□□□□□ -2.02
SNX3O60493 RNU6-91P-201ENST00000607774 107 ntBASIC2.42□□□□□ -2.02
SNX3O60493 DISC2.1-201ENST00000612827 205 ntBASIC2.42□□□□□ -2.02
SNX3O60493 MIR3529-201ENST00000637713 78 ntBASIC2.42□□□□□ -2.02
SNX3O60493 MTND5P30-201ENST00000452896 1731 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC027514.1-201ENST00000588561 1603 ntBASIC2.42□□□□□ -2.02
SNX3O60493 OR4G1P-203ENST00000641984 1631 ntBASIC2.42□□□□□ -2.02
SNX3O60493 AC080100.1-201ENST00000624239 5356 ntBASIC2.41□□□□□ -2.02
SNX3O60493 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms