Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
ZIC3O60481 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
ZIC3O60481 RNU6-78P-201ENST00000362897 107 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 RNA5SP383-201ENST00000362934 120 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 SNORA71.1-201ENST00000364523 117 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.76□□□□□ -1.97
ZIC3O60481 MIR128-1-201ENST00000384921 82 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 RNU1-101P-201ENST00000391171 127 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AL445529.1-201ENST00000398713 389 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AL138885.1-201ENST00000405921 675 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 RNU4-14P-201ENST00000410858 122 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.76□□□□□ -1.97
ZIC3O60481 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.76□□□□□ -1.97
ZIC3O60481 RPS15AP5-201ENST00000436276 388 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 FABP5P14-201ENST00000437273 393 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC125238.1-201ENST00000448842 249 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC107399.1-201ENST00000451226 265 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 RPS29P2-201ENST00000479278 136 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC006483.1-201ENST00000487308 313 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 RPS27P27-201ENST00000498779 255 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 RN7SKP24-201ENST00000515888 284 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 SNORA43.2-201ENST00000516652 128 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 SNORD59.2-201ENST00000516873 68 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC109479.2-201ENST00000517842 174 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC093331.1-201ENST00000521474 169 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AP004607.1-201ENST00000524456 203 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AP002404.1-201ENST00000532005 451 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.76□□□□□ -1.97
ZIC3O60481 AC024153.1-201ENST00000603103 365 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC113139.1-201ENST00000605049 239 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 AC016727.1-205ENST00000605437 569 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.76□□□□□ -1.97
ZIC3O60481 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.76□□□□□ -1.97
ZIC3O60481 U4.7-201ENST00000638126 106 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ZIC3O60481 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC2.76□□□□□ -1.97
ZIC3O60481 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.76□□□□□ -1.97
ZIC3O60481 AL079305.1-201ENST00000623159 3008 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 MAPK10-362ENST00000641864 4484 ntBASIC2.76□□□□□ -1.97
ZIC3O60481 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.75□□□□□ -1.97
ZIC3O60481 RNU4-79P-201ENST00000362764 141 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 RNU5E-7P-201ENST00000365290 117 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 RNU6-827P-201ENST00000365553 106 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 RPL37P10-201ENST00000412884 288 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.75□□□□□ -1.97
ZIC3O60481 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZIC3O60481 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.75□□□□□ -1.97
ZIC3O60481 RPL23AP22-201ENST00000437556 453 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZIC3O60481 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZIC3O60481 RPS27P29-201ENST00000463110 252 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 RN7SL20P-201ENST00000488827 297 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.75□□□□□ -1.97
ZIC3O60481 RPL39P5-202ENST00000512505 151 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 RNU6-581P-201ENST00000516214 105 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 AC009812.2-201ENST00000517657 457 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 AC022634.1-201ENST00000520765 532 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.75□□□□□ -1.97
ZIC3O60481 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.75□□□□□ -1.97
ZIC3O60481 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.75□□□□□ -1.97
ZIC3O60481 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.75□□□□□ -1.97
ZIC3O60481 AC020895.1-201ENST00000595362 272 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 AL121917.1-203ENST00000605534 577 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 AC004852.3-201ENST00000614131 326 ntBASIC2.75□□□□□ -1.97
ZIC3O60481 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.75□□□□□ -1.97
ZIC3O60481 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ZIC3O60481 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ZIC3O60481 MTND4P29-201ENST00000503122 1372 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 ADAM3A-203ENST00000461344 2157 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZIC3O60481 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ZIC3O60481 AC073325.2-201ENST00000339545 159 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 Y_RNA.387-201ENST00000383918 102 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 ATG3P1-201ENST00000419507 911 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 TRIAP1P1-201ENST00000427062 225 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.74□□□□□ -1.97
ZIC3O60481 AL031274.1-201ENST00000450334 232 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.74□□□□□ -1.97
ZIC3O60481 RNU7-187P-201ENST00000458985 68 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 Y_RNA.635-201ENST00000459041 101 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.74□□□□□ -1.97
ZIC3O60481 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.74□□□□□ -1.97
ZIC3O60481 AC116655.1-201ENST00000508324 901 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 MTCYBP40-201ENST00000509390 1135 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.74□□□□□ -1.97
ZIC3O60481 Y_RNA.675-201ENST00000516389 149 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.74□□□□□ -1.97
ZIC3O60481 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.74□□□□□ -1.97
ZIC3O60481 IMMP1LP2-201ENST00000552954 492 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 TRAV32-201ENST00000553993 340 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.74□□□□□ -1.97
ZIC3O60481 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.74□□□□□ -1.97
ZIC3O60481 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.74□□□□□ -1.97
ZIC3O60481 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.74□□□□□ -1.97
ZIC3O60481 AL160281.1-201ENST00000605307 311 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 AC011890.2-201ENST00000613393 294 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.74□□□□□ -1.97
ZIC3O60481 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms