Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FABP5P15-201ENST00000453566 214 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AC023194.1-201ENST00000493084 308 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC0.27□□□□□ -2.37
SSSCA1O60232 SNORA3.4-201ENST00000515969 96 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.27□□□□□ -2.37
SSSCA1O60232 AL353997.4-201ENST00000586196 166 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AC093788.1-201ENST00000609356 927 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AC009237.15-201ENST00000610252 501 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 AC107905.1-201ENST00000616204 426 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.27□□□□□ -2.37
SSSCA1O60232 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.27□□□□□ -2.37
SSSCA1O60232 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SSSCA1O60232 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 RNA5SP347-201ENST00000362445 119 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 RNU6-1078P-201ENST00000364522 103 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 MIR23A-201ENST00000385245 73 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AL133264.1-201ENST00000407157 562 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 Y_RNA.595-201ENST00000410403 105 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.26□□□□□ -2.37
SSSCA1O60232 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.26□□□□□ -2.37
SSSCA1O60232 EBAG9P1-201ENST00000418955 543 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
SSSCA1O60232 AC098934.3-201ENST00000430450 190 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 GTF2IP13-201ENST00000438487 386 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.26□□□□□ -2.37
SSSCA1O60232 AC005840.1-201ENST00000498412 377 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 RNA5SP102-201ENST00000516865 106 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 RNA5SP437-201ENST00000517249 129 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC025423.5-201ENST00000550230 219 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC090615.1-201ENST00000577519 154 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC091946.2-201ENST00000606105 291 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.26□□□□□ -2.37
SSSCA1O60232 AC130324.3-201ENST00000614165 542 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 uc_338.15-201ENST00000615470 191 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
SSSCA1O60232 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
SSSCA1O60232 Y_RNA.124-201ENST00000363339 93 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 RNU1-93P-201ENST00000364704 169 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 SNORA50A-201ENST00000384225 134 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 RNU6-110P-201ENST00000384508 104 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
SSSCA1O60232 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SSSCA1O60232 AC063976.4-201ENST00000421971 163 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.25□□□□□ -2.37
SSSCA1O60232 AC092628.1-201ENST00000436250 252 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.25□□□□□ -2.37
SSSCA1O60232 MTCO2P25-201ENST00000447065 681 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 RPL30P6-201ENST00000475925 342 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 AC108078.2-201ENST00000510750 236 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.25□□□□□ -2.37
SSSCA1O60232 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.25□□□□□ -2.37
SSSCA1O60232 AC018630.3-201ENST00000542637 96 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.25□□□□□ -2.37
SSSCA1O60232 AC090578.1-201ENST00000604955 591 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SSSCA1O60232 AC083806.3-201ENST00000614016 455 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 MIR1248-201ENST00000629190 106 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SSSCA1O60232 MIR5087-201ENST00000635826 76 ntBASIC0.25□□□□□ -2.37
SSSCA1O60232 DBF4P1-201ENST00000412976 1892 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
SSSCA1O60232 RNU6-898P-201ENST00000365627 104 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 MIR520A-201ENST00000384862 85 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 RNU2-7P-201ENST00000410794 178 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 AL139421.1-201ENST00000423010 169 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.24□□□□□ -2.37
SSSCA1O60232 AL358794.1-201ENST00000445689 381 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 RAD1P2-201ENST00000446414 663 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 OFD1P3Y-201ENST00000453312 783 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.24□□□□□ -2.37
SSSCA1O60232 AC026410.2-201ENST00000460281 156 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 RNU5A-4P-201ENST00000516588 111 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 AC006518.2-201ENST00000542513 940 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.24□□□□□ -2.37
SSSCA1O60232 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
SSSCA1O60232 RMST_4.1-201ENST00000616886 107 ntBASIC0.24□□□□□ -2.37
SSSCA1O60232 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.24□□□□□ -2.37
SSSCA1O60232 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
SSSCA1O60232 RNY1P10-201ENST00000363268 113 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 RNU6-945P-201ENST00000383947 107 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 RNU6-331P-201ENST00000384724 107 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.23□□□□□ -2.37
SSSCA1O60232 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.23□□□□□ -2.37
SSSCA1O60232 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.23□□□□□ -2.37
SSSCA1O60232 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.23□□□□□ -2.37
SSSCA1O60232 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.23□□□□□ -2.37
SSSCA1O60232 RPS27AP8-201ENST00000452665 445 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC0.23□□□□□ -2.37
SSSCA1O60232 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC0.23□□□□□ -2.37
SSSCA1O60232 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.23□□□□□ -2.37
SSSCA1O60232 AC097473.1-201ENST00000508142 408 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.23□□□□□ -2.37
SSSCA1O60232 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.23□□□□□ -2.37
SSSCA1O60232 AC091489.2-201ENST00000566263 604 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AF038458.1-201ENST00000588406 262 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AL590229.1-201ENST00000603497 542 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 AC107304.1-201ENST00000604229 296 ntBASIC0.23□□□□□ -2.37
SSSCA1O60232 BNIP3P31-201ENST00000604515 566 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 177.9 ms