Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.62□□□□□ -1.99
SSX4O60224 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AC107016.2-201ENST00000547968 190 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AC078814.3-201ENST00000553036 491 ntBASIC2.62□□□□□ -1.99
SSX4O60224 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.62□□□□□ -1.99
SSX4O60224 AC008121.1-201ENST00000603244 268 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AP000907.4-201ENST00000604143 237 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AC123912.5-201ENST00000605470 343 ntBASIC2.62□□□□□ -1.99
SSX4O60224 RNU6-6P-201ENST00000606623 107 ntBASIC2.62□□□□□ -1.99
SSX4O60224 AC103705.1-201ENST00000619013 241 ntBASIC2.62□□□□□ -1.99
SSX4O60224 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.62□□□□□ -1.99
SSX4O60224 RMST_7.1-201ENST00000621935 268 ntBASIC2.62□□□□□ -1.99
SSX4O60224 MIR7515-201ENST00000637837 67 ntBASIC2.62□□□□□ -1.99
SSX4O60224 MIR622-201ENST00000638396 96 ntBASIC2.62□□□□□ -1.99
SSX4O60224 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX4O60224 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
SSX4O60224 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SSX4O60224 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SSX4O60224 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SSX4O60224 SNORA25.6-201ENST00000364121 118 ntBASIC2.61□□□□□ -1.99
SSX4O60224 SNORA68.1-201ENST00000364537 132 ntBASIC2.61□□□□□ -1.99
SSX4O60224 RNA5SP274-201ENST00000410484 108 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AL513477.1-202ENST00000417061 214 ntBASIC2.61□□□□□ -1.99
SSX4O60224 ARL5AP1-201ENST00000418991 388 ntBASIC2.61□□□□□ -1.99
SSX4O60224 HMGB1P31-201ENST00000437242 427 ntBASIC2.61□□□□□ -1.99
SSX4O60224 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX4O60224 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX4O60224 SNORA14.1-201ENST00000516113 141 ntBASIC2.61□□□□□ -1.99
SSX4O60224 SNORA43.2-201ENST00000516652 128 ntBASIC2.61□□□□□ -1.99
SSX4O60224 SCARNA11.3-201ENST00000517276 130 ntBASIC2.61□□□□□ -1.99
SSX4O60224 BTF3P12-201ENST00000519620 469 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX4O60224 CYCSP27-201ENST00000527643 293 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX4O60224 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.61□□□□□ -1.99
SSX4O60224 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.61□□□□□ -1.99
SSX4O60224 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AC009163.5-201ENST00000575421 637 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX4O60224 AL670379.10-201ENST00000604330 253 ntBASIC2.61□□□□□ -1.99
SSX4O60224 APOOP1-201ENST00000604695 592 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AL033523.1-201ENST00000605153 153 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AL670379.9-201ENST00000605428 253 ntBASIC2.61□□□□□ -1.99
SSX4O60224 AL160394.1-201ENST00000624765 724 ntBASIC2.61□□□□□ -1.99
SSX4O60224 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.61□□□□□ -1.99
SSX4O60224 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
SSX4O60224 Z82195.2-201ENST00000612348 18351 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AC073325.2-201ENST00000339545 159 ntBASIC2.6□□□□□ -1.99
SSX4O60224 Y_RNA.167-201ENST00000363735 109 ntBASIC2.6□□□□□ -1.99
SSX4O60224 RNU6-522P-201ENST00000364497 107 ntBASIC2.6□□□□□ -1.99
SSX4O60224 RNU5E-7P-201ENST00000365290 117 ntBASIC2.6□□□□□ -1.99
SSX4O60224 SNORD116-20-201ENST00000384529 92 ntBASIC2.6□□□□□ -1.99
SSX4O60224 RNU6-332P-201ENST00000391193 108 ntBASIC2.6□□□□□ -1.99
SSX4O60224 Y_RNA.615-201ENST00000410769 117 ntBASIC2.6□□□□□ -1.99
SSX4O60224 SRIP2-201ENST00000428470 166 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.6□□□□□ -1.99
SSX4O60224 AP000705.1-201ENST00000454567 350 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.6□□□□□ -1.99
SSX4O60224 AL441985.1-201ENST00000457727 251 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AP001324.2-201ENST00000461163 319 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AC117503.1-201ENST00000472241 394 ntBASIC2.6□□□□□ -1.99
SSX4O60224 MED28P2-201ENST00000475771 317 ntBASIC2.6□□□□□ -1.99
SSX4O60224 RPS29P25-201ENST00000481709 171 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AC103975.1-201ENST00000482506 483 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AIG1P1-201ENST00000503376 148 ntBASIC2.6□□□□□ -1.99
SSX4O60224 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.6□□□□□ -1.99
SSX4O60224 AC069113.1-201ENST00000517763 267 ntBASIC2.6□□□□□ -1.99
SSX4O60224 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SSX4O60224 AC023050.3-201ENST00000541142 333 ntBASIC2.6□□□□□ -1.99
SSX4O60224 CR383656.8-201ENST00000549046 145 ntBASIC2.6□□□□□ -1.99
SSX4O60224 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.6□□□□□ -1.99
SSX4O60224 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.6□□□□□ -1.99
SSX4O60224 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.6□□□□□ -1.99
SSX4O60224 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.6□□□□□ -1.99
SSX4O60224 AC024153.1-201ENST00000603103 365 ntBASIC2.6□□□□□ -1.99
SSX4O60224 AC104458.1-201ENST00000608243 463 ntBASIC2.6□□□□□ -1.99
SSX4O60224 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.6□□□□□ -1.99
SSX4O60224 AC007318.2-201ENST00000620999 243 ntBASIC2.6□□□□□ -1.99
SSX4O60224 MIR3662-201ENST00000637030 95 ntBASIC2.6□□□□□ -1.99
SSX4O60224 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SSX4O60224 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SSX4O60224 RNU6-78P-201ENST00000362897 107 ntBASIC2.59□□□□□ -1.99
SSX4O60224 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
SSX4O60224 RNU6-1180P-201ENST00000364935 107 ntBASIC2.59□□□□□ -1.99
SSX4O60224 RNU6-1083P-201ENST00000384022 107 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AL133475.1-201ENST00000404414 305 ntBASIC2.59□□□□□ -1.99
SSX4O60224 RNU4-26P-201ENST00000410270 107 ntBASIC2.59□□□□□ -1.99
SSX4O60224 RNU6-1328P-201ENST00000410938 106 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.59□□□□□ -1.99
SSX4O60224 AL096701.2-201ENST00000416920 238 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.59□□□□□ -1.99
SSX4O60224 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.59□□□□□ -1.99
SSX4O60224 MTATP6P13-201ENST00000438531 667 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AL513043.1-201ENST00000439124 535 ntBASIC2.59□□□□□ -1.99
SSX4O60224 MRPL50P4-201ENST00000446432 475 ntBASIC2.59□□□□□ -1.99
SSX4O60224 FGF7P6-202ENST00000451282 293 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AC006026.2-201ENST00000457376 180 ntBASIC2.59□□□□□ -1.99
SSX4O60224 RPL23AP45-201ENST00000476406 468 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AC083904.1-201ENST00000487828 231 ntBASIC2.59□□□□□ -1.99
SSX4O60224 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms