Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-16P-201ENST00000384385 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-15P-201ENST00000384534 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-2-201ENST00000384627 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-29P-201ENST00000384637 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-9-201ENST00000384776 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-33P-201ENST00000384793 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 VN1R36P-201ENST00000414936 291 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 NDUFB4P5-201ENST00000415445 361 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.51□□□□□ -1.85
PRPF3O43395 AL645568.3-201ENST00000433683 316 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF3O43395 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.51□□□□□ -1.85
PRPF3O43395 snoU109.2-201ENST00000459316 135 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 AC133134.1-201ENST00000466800 359 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RPL23AP45-201ENST00000476406 468 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 GZMAP1-201ENST00000503054 631 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 MTCYBP40-201ENST00000509390 1135 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.51□□□□□ -1.85
PRPF3O43395 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.51□□□□□ -1.85
PRPF3O43395 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF3O43395 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF3O43395 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF3O43395 AC023043.2-201ENST00000589678 1026 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 AC021646.1-201ENST00000605469 484 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 RNU6-6P-201ENST00000606623 107 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 AC025253.1-201ENST00000613623 543 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 AC104260.1-201ENST00000616660 539 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.51□□□□□ -1.85
PRPF3O43395 AC007318.2-201ENST00000620999 243 ntBASIC3.51□□□□□ -1.85
PRPF3O43395 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF3O43395 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF3O43395 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF3O43395 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF3O43395 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-1252P-201ENST00000363054 104 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-843P-201ENST00000384454 104 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AL360182.1-201ENST00000397433 468 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 RNA5SP390-201ENST00000410191 113 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-1245P-201ENST00000411130 106 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-293P-201ENST00000411259 106 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AL139396.1-201ENST00000421137 167 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AL591043.1-201ENST00000432461 424 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF3O43395 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF3O43395 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF3O43395 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF3O43395 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF3O43395 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-1037P-201ENST00000459571 107 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AC114801.2-201ENST00000503825 781 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-581P-201ENST00000516214 105 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 RNU6-875P-201ENST00000516488 106 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AC026371.1-201ENST00000551867 419 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.5□□□□□ -1.85
PRPF3O43395 MIR4742-201ENST00000581069 85 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 BNIP3P16-201ENST00000589779 534 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AL356157.2-201ENST00000605122 111 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 AC005858.4-201ENST00000623191 700 ntBASIC3.5□□□□□ -1.85
PRPF3O43395 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PRPF3O43395 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PRPF3O43395 AC093010.3-201ENST00000570269 15214 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC010329.5-201ENST00000623497 2174 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.49□□□□□ -1.85
PRPF3O43395 SNORA71.1-201ENST00000364523 117 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RNU6-1329P-201ENST00000365664 107 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RNU6-1009P-201ENST00000390996 107 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RPL21P3-201ENST00000395517 478 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 FTH1P15-201ENST00000406984 280 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RNA5SP274-201ENST00000410484 108 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC245054.2-201ENST00000415639 319 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RNU6-329P-201ENST00000459618 107 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC146507.2-201ENST00000460608 476 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RPL23AP49-201ENST00000492925 468 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 RAC1P5-201ENST00000512182 576 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.49□□□□□ -1.85
PRPF3O43395 SCOCP1-201ENST00000554676 349 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC3.49□□□□□ -1.85
PRPF3O43395 AC005668.1-201ENST00000571142 476 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.49□□□□□ -1.85
PRPF3O43395 AC009994.1-201ENST00000606889 253 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 uc_338.5-201ENST00000611839 155 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC138627.2-201ENST00000624202 601 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF3O43395 ATP8A2P2-201ENST00000437678 1568 ntBASIC3.49□□□□□ -1.85
PRPF3O43395 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF3O43395 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.49□□□□□ -1.85
PRPF3O43395 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF3O43395 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF3O43395 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.48□□□□□ -1.85
PRPF3O43395 RNU6-858P-201ENST00000362436 107 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PRPF3O43395 U3.26-201ENST00000391236 204 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 RPS29P13-201ENST00000402041 169 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
PRPF3O43395 AL117339.3-201ENST00000418733 162 ntBASIC3.48□□□□□ -1.85
PRPF3O43395 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF3O43395 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.48□□□□□ -1.85
PRPF3O43395 UQCRHP3-201ENST00000451503 251 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms