Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SNORD115-3-201ENST00000363100 82 ntBASIC1.69□□□□□ -2.14
LSM1O15116 RNU6-39P-201ENST00000384344 107 ntBASIC1.69□□□□□ -2.14
LSM1O15116 SNORD14D-201ENST00000384390 87 ntBASIC1.69□□□□□ -2.14
LSM1O15116 Y_RNA.608-201ENST00000410647 95 ntBASIC1.69□□□□□ -2.14
LSM1O15116 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
LSM1O15116 EEF1A1P40-201ENST00000412883 573 ntBASIC1.69□□□□□ -2.14
LSM1O15116 SRIP3-201ENST00000413200 219 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AC114491.1-201ENST00000416095 246 ntBASIC1.69□□□□□ -2.14
LSM1O15116 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM1O15116 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM1O15116 HSFY7P-201ENST00000432672 318 ntBASIC1.69□□□□□ -2.14
LSM1O15116 HSFY8P-201ENST00000437934 318 ntBASIC1.69□□□□□ -2.14
LSM1O15116 MTND5P2-201ENST00000442927 1142 ntBASIC1.69□□□□□ -2.14
LSM1O15116 HSFY5P-201ENST00000453726 309 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AL353752.1-201ENST00000454946 260 ntBASIC1.69□□□□□ -2.14
LSM1O15116 RNA5SP57-201ENST00000459463 123 ntBASIC1.69□□□□□ -2.14
LSM1O15116 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
LSM1O15116 PTP4A1P4-201ENST00000512479 322 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.69□□□□□ -2.14
LSM1O15116 SNORA43.2-201ENST00000516652 128 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM1O15116 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
LSM1O15116 GNAI2P1-201ENST00000541815 315 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AL031775.1-201ENST00000607014 887 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AC138749.5-201ENST00000611461 208 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AC091834.1-201ENST00000614543 472 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AC116165.2-201ENST00000616705 206 ntBASIC1.69□□□□□ -2.14
LSM1O15116 RMST_7.1-201ENST00000621935 268 ntBASIC1.69□□□□□ -2.14
LSM1O15116 AL078595.3-201ENST00000623815 1166 ntBASIC1.69□□□□□ -2.14
LSM1O15116 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.69□□□□□ -2.14
LSM1O15116 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM1O15116 OR4G2P-201ENST00000328113 903 ntBASIC1.68□□□□□ -2.14
LSM1O15116 RNU6-500P-201ENST00000362349 107 ntBASIC1.68□□□□□ -2.14
LSM1O15116 RNU6-371P-201ENST00000364283 108 ntBASIC1.68□□□□□ -2.14
LSM1O15116 RNU6-533P-201ENST00000384144 107 ntBASIC1.68□□□□□ -2.14
LSM1O15116 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LSM1O15116 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM1O15116 RPL32P28-201ENST00000443577 397 ntBASIC1.68□□□□□ -2.14
LSM1O15116 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM1O15116 AP000797.1-201ENST00000478870 387 ntBASIC1.68□□□□□ -2.14
LSM1O15116 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM1O15116 MTND4LP18-201ENST00000526864 291 ntBASIC1.68□□□□□ -2.14
LSM1O15116 AP003181.2-201ENST00000528941 181 ntBASIC1.68□□□□□ -2.14
LSM1O15116 BNIP3P6-201ENST00000549284 499 ntBASIC1.68□□□□□ -2.14
LSM1O15116 AL354943.1-201ENST00000572103 781 ntBASIC1.68□□□□□ -2.14
LSM1O15116 MIR5697-201ENST00000578045 78 ntBASIC1.68□□□□□ -2.14
LSM1O15116 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.68□□□□□ -2.14
LSM1O15116 AC008751.2-201ENST00000597885 980 ntBASIC1.68□□□□□ -2.14
LSM1O15116 DEFB131E-202ENST00000602581 683 ntBASIC1.68□□□□□ -2.14
LSM1O15116 AL353778.1-201ENST00000603149 408 ntBASIC1.68□□□□□ -2.14
LSM1O15116 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.68□□□□□ -2.14
LSM1O15116 AC087241.4-201ENST00000612441 480 ntBASIC1.68□□□□□ -2.14
LSM1O15116 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.68□□□□□ -2.14
LSM1O15116 RNU5F-6P-201ENST00000362979 116 ntBASIC1.67□□□□□ -2.14
LSM1O15116 CISD1P1-201ENST00000393907 327 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AC068050.1-201ENST00000394891 380 ntBASIC1.67□□□□□ -2.14
LSM1O15116 POLHP1-201ENST00000411806 470 ntBASIC1.67□□□□□ -2.14
LSM1O15116 MTCYBP5-201ENST00000423752 1135 ntBASIC1.67□□□□□ -2.14
LSM1O15116 UBE2V1P4-201ENST00000425374 344 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AL645568.3-201ENST00000433683 316 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.67□□□□□ -2.14
LSM1O15116 AC104058.1-201ENST00000448028 297 ntBASIC1.67□□□□□ -2.14
LSM1O15116 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM1O15116 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM1O15116 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM1O15116 AC010587.1-201ENST00000505809 469 ntBASIC1.67□□□□□ -2.14
LSM1O15116 MTCO3P9-201ENST00000506989 781 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AC108078.2-201ENST00000510750 236 ntBASIC1.67□□□□□ -2.14
LSM1O15116 RNU1-86P-201ENST00000516108 154 ntBASIC1.67□□□□□ -2.14
LSM1O15116 RNU6-123P-201ENST00000516163 102 ntBASIC1.67□□□□□ -2.14
LSM1O15116 RNU6-311P-201ENST00000516224 102 ntBASIC1.67□□□□□ -2.14
LSM1O15116 RNU1-107P-201ENST00000516617 154 ntBASIC1.67□□□□□ -2.14
LSM1O15116 ADI1P3-201ENST00000549509 470 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AC105129.3-201ENST00000605455 485 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AL139286.2-201ENST00000606838 396 ntBASIC1.67□□□□□ -2.14
LSM1O15116 RNU6-87P-201ENST00000607561 108 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AL451064.1-201ENST00000607718 471 ntBASIC1.67□□□□□ -2.14
LSM1O15116 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM1O15116 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.67□□□□□ -2.14
LSM1O15116 U6.42-201ENST00000618440 107 ntBASIC1.67□□□□□ -2.14
LSM1O15116 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.67□□□□□ -2.14
LSM1O15116 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.67□□□□□ -2.14
LSM1O15116 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LSM1O15116 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LSM1O15116 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
LSM1O15116 MIR126-201ENST00000362291 85 ntBASIC1.66□□□□□ -2.14
LSM1O15116 Y_RNA.22-201ENST00000362492 102 ntBASIC1.66□□□□□ -2.14
LSM1O15116 RNU6-925P-201ENST00000384629 104 ntBASIC1.66□□□□□ -2.14
LSM1O15116 MIR558-201ENST00000384920 94 ntBASIC1.66□□□□□ -2.14
LSM1O15116 MTCYBP36-201ENST00000404146 440 ntBASIC1.66□□□□□ -2.14
LSM1O15116 RN7SKP51-201ENST00000410781 304 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AC098592.1-201ENST00000419352 333 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.66□□□□□ -2.14
LSM1O15116 MED13P1-201ENST00000428342 171 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AL365184.2-201ENST00000431139 435 ntBASIC1.66□□□□□ -2.14
LSM1O15116 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM1O15116 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.66□□□□□ -2.14
LSM1O15116 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM1O15116 MTND2P39-201ENST00000457230 764 ntBASIC1.66□□□□□ -2.14
LSM1O15116 RPS29P21-201ENST00000496272 170 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms