Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 RNU6-744P-201ENST00000365557 107 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-1316P-201ENST00000384242 108 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORA40C-201ENST00000391285 128 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 BX664727.1-201ENST00000416024 466 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 EBAG9P1-201ENST00000418955 543 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 PIGFP2-201ENST00000421400 651 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AC079776.3-201ENST00000450665 370 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 SNORA3.4-201ENST00000515969 96 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 HMGB1P33-201ENST00000563485 527 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AC060771.1-201ENST00000582031 164 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AL589994.2-201ENST00000621124 579 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 AC245060.5-201ENST00000610778 3293 ntBASIC0.6□□□□□ -2.31
TRBV27A0A0K0K1C4 Y_RNA.40-201ENST00000362645 93 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU5B-1-201ENST00000363286 116 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR146A-201ENST00000385201 99 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 MIR100-201ENST00000385259 80 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RNA5SP213-201ENST00000391031 106 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 SNX2P2-201ENST00000424553 323 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 CBX3P6-201ENST00000430257 527 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AL353752.1-201ENST00000454946 260 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RPL18AP17-201ENST00000455326 198 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RPL31P3-201ENST00000458430 332 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RPL39P36-201ENST00000490784 156 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC103851.1-201ENST00000506833 274 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC112198.4-201ENST00000515450 351 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RN7SKP88-201ENST00000516847 250 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 RNU6-1092P-201ENST00000516955 87 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC078795.2-201ENST00000602835 1252 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 FAM71BP1-201ENST00000604431 523 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC025754.2-201ENST00000606491 432 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 7SK.8-201ENST00000612110 250 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 7SK.11-201ENST00000615477 250 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 7SK.13-201ENST00000622040 250 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 OR4G3P-201ENST00000633500 913 ntBASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.59□□□□□ -2.31
TRBV27A0A0K0K1C4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
TRBV27A0A0K0K1C4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 snoU2_19.1-201ENST00000362361 80 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RNU6-166P-201ENST00000384371 107 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 MIR520A-201ENST00000384862 85 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 MIR548B-201ENST00000385247 97 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RPL17P50-201ENST00000396131 546 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 Y_RNA.597-201ENST00000410463 100 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RNU2-64P-201ENST00000411315 191 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AC006461.1-201ENST00000412637 326 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AP1B1P2-201ENST00000416196 106 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RPS15AP12-201ENST00000419498 388 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AL606490.4-201ENST00000423117 127 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AC010095.1-201ENST00000443543 144 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 SNORA59A-201ENST00000459326 152 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 snoU13.14-201ENST00000459372 104 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RPL23AP94-201ENST00000512518 302 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 CYCSP23-201ENST00000519781 313 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 MIR6857-201ENST00000613267 93 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RMST_4.1-201ENST00000616886 107 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AP000676.3-201ENST00000623299 569 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AL136313.1-201ENST00000624804 202 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 AL512643.1-201ENST00000635735 524 ntBASIC0.58□□□□□ -2.32
TRBV27A0A0K0K1C4 RNU6-212P-201ENST00000362642 104 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 SNORA4.1-201ENST00000364263 144 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 MIR515-2-201ENST00000384883 83 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 MIR515-1-201ENST00000384884 83 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 RNU2-23P-201ENST00000410545 195 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AC004965.1-201ENST00000413033 213 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AC016831.2-201ENST00000417179 352 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AC005094.1-201ENST00000440420 368 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 MTND4P25-201ENST00000441039 533 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 RPS4XP11-201ENST00000446897 772 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AL606517.1-201ENST00000446914 387 ntBASIC0.57□□□□□ -2.32
TRBV27A0A0K0K1C4 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms