Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm10052-201ENSMUST00000168019 960 ntBASIC16.19■□□□□ 0.18
H2afb2S4R1M3 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Gm7729-201ENSMUST00000050143 801 ntBASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
H2afb2S4R1M3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Gm6623-201ENSMUST00000173570 544 ntBASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2afb2S4R1M3 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Gm44430-201ENSMUST00000203376 995 ntBASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2afb2S4R1M3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2afb2S4R1M3 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.15■□□□□ 0.18
H2afb2S4R1M3 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms