Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
H2afb1S4R1E0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
H2afb1S4R1E0 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Actl10-202ENSMUST00000226583 1501 ntBASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
H2afb1S4R1E0 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
H2afb1S4R1E0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms