Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Il3ra-202ENSMUST00000223589 738 ntBASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Rfwd2Q9R1A8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Gm7791-201ENSMUST00000219066 539 ntBASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Rfwd2Q9R1A8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Rfwd2Q9R1A8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Rfwd2Q9R1A8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms