Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Gm16061-201ENSMUST00000122167 857 ntBASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Herpud1Q9JJK5 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Gm13436-201ENSMUST00000120418 567 ntBASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Gm2274-201ENSMUST00000184539 609 ntBASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Gm10566-201ENSMUST00000086739 996 ntBASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Herpud1Q9JJK5 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Slc35b2-202ENSMUST00000223987 1766 ntBASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Gm13474-201ENSMUST00000122466 815 ntBASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Gm20472-201ENSMUST00000174403 1240 ntBASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Herpud1Q9JJK5 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Herpud1Q9JJK5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Herpud1Q9JJK5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms