Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClpxQ9JHS4 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Gm12085-201ENSMUST00000119263 940 ntBASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.82□□□□□ -0.04
ClpxQ9JHS4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
ClpxQ9JHS4 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gm17661-201ENSMUST00000170317 270 ntBASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gm9484-201ENSMUST00000195892 1159 ntBASIC14.8□□□□□ -0.04
ClpxQ9JHS4 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gm30025-201ENSMUST00000218555 728 ntBASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClpxQ9JHS4 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms