Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgn3Q9DCB1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Gm24841-201ENSMUST00000158676 357 ntBASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgn3Q9DCB1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Hmgn3Q9DCB1 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Gm37025-201ENSMUST00000195159 829 ntBASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Hmgn3Q9DCB1 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Hmgn3Q9DCB1 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Hmgn3Q9DCB1 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms