Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cdc40Q9DC48 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15□□□□□ -0.01
Cdc40Q9DC48 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdc40Q9DC48 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15□□□□□ -0.01
Cdc40Q9DC48 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15□□□□□ -0.01
Cdc40Q9DC48 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15□□□□□ -0.01
Cdc40Q9DC48 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cdc40Q9DC48 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cdc40Q9DC48 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cdc40Q9DC48 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gm27357-201ENSMUST00000183754 135 ntBASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cdc40Q9DC48 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Olfr129-201ENSMUST00000122318 993 ntBASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Gm44450-201ENSMUST00000199528 114 ntBASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms