Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp8Q9DB85 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Rrp8Q9DB85 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.8■□□□□ 0.12
Rrp8Q9DB85 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.8■□□□□ 0.12
Rrp8Q9DB85 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Rrp8Q9DB85 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.79■□□□□ 0.12
Rrp8Q9DB85 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rrp8Q9DB85 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Gm14822-201ENSMUST00000122247 291 ntBASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rrp8Q9DB85 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rrp8Q9DB85 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms