Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Gm29707-201ENSMUST00000196325 491 ntBASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Ndc80Q9D0F1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC16.46■□□□□ 0.22
Ndc80Q9D0F1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC16.46■□□□□ 0.22
Ndc80Q9D0F1 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ndc80Q9D0F1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ndc80Q9D0F1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ndc80Q9D0F1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Ndc80Q9D0F1 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.45■□□□□ 0.22
Ndc80Q9D0F1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ndc80Q9D0F1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ndc80Q9D0F1 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ndc80Q9D0F1 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms