Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Sybu-209ENSMUST00000228639 4113 ntBASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim13Q9CYB0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim13Q9CYB0 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 AC135637.1-201ENSMUST00000227750 365 ntBASIC14.97□□□□□ -0.01
Trim13Q9CYB0 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Gm45212-201ENSMUST00000205831 3403 ntBASIC14.97□□□□□ -0.01
Trim13Q9CYB0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Trmt13-210ENSMUST00000198454 880 ntBASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim13Q9CYB0 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim13Q9CYB0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim13Q9CYB0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Trim13Q9CYB0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim13Q9CYB0 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim13Q9CYB0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.95□□□□□ -0.02
Trim13Q9CYB0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trim13Q9CYB0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms