Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Smc3Q9CW03 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.03■□□□□ 0.64
Smc3Q9CW03 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Gm36967-201ENSMUST00000193814 266 ntBASIC19.03■□□□□ 0.64
Smc3Q9CW03 AL672049.1-201ENSMUST00000197943 91 ntBASIC19.03■□□□□ 0.64
Smc3Q9CW03 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.03■□□□□ 0.64
Smc3Q9CW03 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.02■□□□□ 0.64
Smc3Q9CW03 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.02■□□□□ 0.64
Smc3Q9CW03 Gm29707-201ENSMUST00000196325 491 ntBASIC19.02■□□□□ 0.64
Smc3Q9CW03 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.02■□□□□ 0.64
Smc3Q9CW03 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.02■□□□□ 0.64
Smc3Q9CW03 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Smc3Q9CW03 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Smc3Q9CW03 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.01■□□□□ 0.63
Smc3Q9CW03 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.01■□□□□ 0.63
Smc3Q9CW03 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Smc3Q9CW03 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc3Q9CW03 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19■□□□□ 0.63
Smc3Q9CW03 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc3Q9CW03 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc3Q9CW03 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Smc3Q9CW03 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Prob1-201ENSMUST00000097619 3021 ntBASIC19■□□□□ 0.63
Smc3Q9CW03 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC19■□□□□ 0.63
Smc3Q9CW03 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Smc3Q9CW03 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.99■□□□□ 0.63
Smc3Q9CW03 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms