Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm14667-201ENSMUST00000119448 1350 ntBASIC20.61■□□□□ 0.89
Rtn4Q99P72 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.61■□□□□ 0.89
Rtn4Q99P72 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC20.61■□□□□ 0.89
Rtn4Q99P72 AC155266.1-201ENSMUST00000220762 904 ntBASIC20.61■□□□□ 0.89
Rtn4Q99P72 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.61■□□□□ 0.89
Rtn4Q99P72 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rtn4Q99P72 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Rtn4Q99P72 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rtn4Q99P72 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Rtn4Q99P72 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rtn4Q99P72 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn4Q99P72 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.58■□□□□ 0.88
Rtn4Q99P72 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn4Q99P72 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Rtn4Q99P72 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rtn4Q99P72 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC20.57■□□□□ 0.88
Rtn4Q99P72 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC20.57■□□□□ 0.88
Rtn4Q99P72 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Gm18421-201ENSMUST00000204122 625 ntBASIC20.57■□□□□ 0.88
Rtn4Q99P72 AC124569.2-201ENSMUST00000225998 818 ntBASIC20.57■□□□□ 0.88
Rtn4Q99P72 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rtn4Q99P72 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rtn4Q99P72 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms